ENST00000488580.6 GCSAM

Information
Transcript ID
ENST00000488580.6
Genome
hg19
Position
chr3:111,842,302-111,852,072
Strand
-
CDS length
486
Amino acid length
162
Gene symbol
GCSAM
Gene type
protein-coding
Gene description
germinal center associated signaling and motility
Gene Entrez Gene ID
257144
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
7 111,842,302 111,842,619
6 111,844,073 111,844,101
5 111,845,834 111,845,880
4 111,846,864 111,846,908
3 111,849,292 111,849,366
2 111,851,484 111,851,757
1 111,851,939 111,852,072
CDS
Exon number Type Start Stop
7 CDS 111,842,302 111,842,619
6 CDS 111,844,073 111,844,101
5 CDS 111,845,834 111,845,880
4 CDS 111,846,864 111,846,908
3 CDS 111,849,292 111,849,338
Other genome
Genome Chromosome Start End Links
hg38 chr3 112,123,455 112,133,225 Link
CDS sequence
ATGCCTTGGAATGTGAGAATGCAAAGCCCCAAACAGAGAACATCCAGATGCTGGGATCACCATATCGCTGAAGGGTGTTTCTGCCTTCCATGGAAAAAAATACTCATTTTTGAAAAGAGGCAAGATTCCCAAAACGAAAATGAAAGAATGTCATCTACTCCCATCCAGGACAATGTTGACCAGACCTACTCAGAGGAGCTGTGCTATACCCTCATCAATCATCGGGTTCTCTGTACAAGGCCATCAGGGAACTCTGCTGAAGAGTACTATGAGAATGTTCCCTGCAAAGCTGAGAGACCCAGAGAGTCCTTGGGAGGAACTGAGACTGAGTATTCACTTCTACATATGCCTTCTACAGACCCCAGGCATGCCCGATCCCCAGAAGATGAATATGAACTTCTCATGCCTCACAGAATCTCCTCTCACTTTCTGCAACAGCCACGTCCACTTATGGCCCCTTCTGAGACTCAGTTTTCCCATTTATAG
Amino sequence
MPWNVRMQSPKQRTSRCWDHHIAEGCFCLPWKKILIFEKRQDSQNENERMSSTPIQDNVDQTYSEELCYTLINHRVLCTRPSGNSAEEYYENVPCKAERPRESLGGTETEYSLLHMPSTDPRHARSPEDEYELLMPHRISSHFLQQPRPLMAPSETQFSHL*