ENST00000319172.10 TMEM39A

Information
Transcript ID
ENST00000319172.10
Genome
hg19
Position
chr3:119,147,796-119,182,462
Strand
-
CDS length
1,467
Amino acid length
489
Gene symbol
TMEM39A
Gene type
protein-coding
Gene description
transmembrane protein 39A
Gene Entrez Gene ID
55254
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
9 119,147,796 119,151,061
8 119,153,609 119,153,729
7 119,155,638 119,155,825
6 119,156,602 119,156,950
5 119,165,865 119,166,019
4 119,171,294 119,171,377
3 119,176,865 119,177,087
2 119,180,809 119,180,995
1 119,182,183 119,182,462
CDS
Exon number Type Start Stop
9 CDS 119,150,828 119,151,061
8 CDS 119,153,609 119,153,729
7 CDS 119,155,638 119,155,825
6 CDS 119,156,602 119,156,950
5 CDS 119,165,865 119,166,019
4 CDS 119,171,294 119,171,377
3 CDS 119,176,865 119,177,087
2 CDS 119,180,809 119,180,921
Other genome
Genome Chromosome Start End Links
hg38 chr3 119,428,949 119,463,615 Link
CDS sequence
ATGCCCGGTGGAAGGAGGGGCCCTAGTCGGCAACAGCTAAGCCGTTCAGCTTTACCTTCTTTGCAGACTTTGGTTGGTGGAGGCTGTGGCAATGGAACAGGCTTGAGAAACAGGAATGGTAGTGCTATTGGCCTTCCAGTCCCACCTATCACAGCCTTAATCACCCCAGGTCCTGTTCGTCATTGCCAAATTCCTGACTTGCCTGTGGATGGGAGCCTACTCTTTGAATTCCTTTTTTTCATCTACCTGTTGGTTGCTCTTTTCATTCAGTACATCAACATTTATAAAACAGTGTGGTGGTATCCTTACAATCATCCTGCTTCTTGTACATCACTGAATTTTCATCTCATTGATTATCATCTGGCAGCATTCATCACAGTGATGCTTGCGAGGAGGCTTGTATGGGCTCTCATCTCAGAGGCTACTAAGGCAGGTGCAGCATCAATGATTCACTACATGGTTCTGATATCAGCTCGCTTGGTACTACTCACTTTGTGTGGATGGGTACTTTGTTGGACCCTCGTCAATCTCTTTCGAAGCCATTCAGTCCTCAATCTCCTTTTCCTTGGCTACCCGTTTGGTGTTTATGTTCCTCTTTGCTGTTTTCATCAAGATAGTAGAGCACATCTTCTTCTCACAGACTACAACTATGTGGTTCAGCACGAGGCAGTAGAGGAAAGTGCCTCGACTGTGGGAGGCTTGGCCAAATCCAAAGACTTTCTCTCCTTGTTGCTGGAGTCGCTAAAAGAACAGTTTAATAATGCCACACCCATCCCCACCCACAGTTGTCCCCTATCTCCAGACCTCATTCGCAATGAAGTAGAATGTCTGAAAGCAGATTTCAACCACAGAATCAAGGAGGTTCTCTTCAACTCCCTCTTCAGTGCCTACTATGTTGCATTTCTCCCCCTGTGTTTTGTGAAGAGTACCCAGTACTATGACATGCGCTGGTCATGTGAGCACCTCATTATGGTGTGGATCAATGCTTTTGTCATGCTCACCACGCAACTGTTGCCATCCAAATACTGTGATTTGCTACATAAATCAGCTGCTCACCTGGGCAAGTGGCAGAAGTTGGAACATGGGTCCTACAGCAATGCTCCACAGCACATTTGGTCAGAAAATACAATATGGCCTCAAGGGGTGCTGGTGCGGCACAGCAGATGTTTATATAGAGCCATGGGGCCTTACAACGTGGCAGTGCCTTCAGATGTATCTCATGCCCGCTTTTATTTCTTATTTCATCGACCATTAAGGCTGTTAAATCTGCTCATCCTTATTGAGGGCAGTGTCGTCTTCTATCAGCTCTATTCCTTGCTGCGGTCGGAGAAGTGGAACCACACACTTTCCATGGCTCTCATCCTCTTCTGCAACTACTATGTTTTATTTAAACTTCTCCGGGACAGAATAGTATTAGGCAGGGCATACTCCTACCCACTCAACAGTTATGAACTCAAGGCAAACTAA
Amino sequence
MPGGRRGPSRQQLSRSALPSLQTLVGGGCGNGTGLRNRNGSAIGLPVPPITALITPGPVRHCQIPDLPVDGSLLFEFLFFIYLLVALFIQYINIYKTVWWYPYNHPASCTSLNFHLIDYHLAAFITVMLARRLVWALISEATKAGAASMIHYMVLISARLVLLTLCGWVLCWTLVNLFRSHSVLNLLFLGYPFGVYVPLCCFHQDSRAHLLLTDYNYVVQHEAVEESASTVGGLAKSKDFLSLLLESLKEQFNNATPIPTHSCPLSPDLIRNEVECLKADFNHRIKEVLFNSLFSAYYVAFLPLCFVKSTQYYDMRWSCEHLIMVWINAFVMLTTQLLPSKYCDLLHKSAAHLGKWQKLEHGSYSNAPQHIWSENTIWPQGVLVRHSRCLYRAMGPYNVAVPSDVSHARFYFLFHRPLRLLNLLILIEGSVVFYQLYSLLRSEKWNHTLSMALILFCNYYVLFKLLRDRIVLGRAYSYPLNSYELKAN*