ENST00000682860.1 LRRC66
Information
- Transcript ID
- ENST00000682860.1
- Genome
- hg19
- Position
- chr4:52,859,818-52,886,529
- Strand
- -
- CDS length
- 2,643
- Amino acid length
- 881
- Gene symbol
- LRRC66
- Gene type
- protein-coding
- Gene description
- leucine rich repeat containing 66
- Gene Entrez Gene ID
- 339977
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 5 | 52,859,818 | 52,862,331 |
| 4 | 52,863,914 | 52,864,103 |
| 3 | 52,869,389 | 52,869,558 |
| 2 | 52,883,284 | 52,883,784 |
| 1 | 52,886,470 | 52,886,529 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 52,860,545 | 52,862,331 |
| 4 | CDS | 52,863,914 | 52,864,103 |
| 3 | CDS | 52,869,389 | 52,869,558 |
| 2 | CDS | 52,883,284 | 52,883,779 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr4 | 51,993,652 | 52,020,363 | Link |
CDS sequence
ATGAAAAACCTCTATTTCAGAGTCATTACCATAGTTATAGGTCTTTATTTTACTGGAATAATGACAAATGCATCAAGAAAAAGCAATATTTTATTCAATTCTGAATGCCAATGGAATGAATATATTCTGACAAATTGTTCTTTTACCGGAAAGTGTGATATACCTGTGGACATATCACAGACAGCAGCCACTGTGGATGTAAGTTTCAATTTCTTTAGAGTTCTCTTACAGTCTCACACGAAAAAAGAAGAGTGGAAAATAAAACATCTGGACCTCAGTAACAATCTCATATCAAAAATAACCTTAAGCCCTTTTGCATATTTACATGCTTTGGAAGTGTTAAACCTCAGCAACAATGCCATCCACTCCCTCTCATTGGATCTACTCAGTCCTAAGTCCTCATGGGTGAAACGCCACAGAAGCAGCTTCAGAAACAGGTTTCCATTGCTGAAGGTGCTCATTCTTCAAAGAAATAAACTCAGTGACACTCCCAAGGGACTGTGGAAACTGAAGTCATTGCAGAGTTTGGATCTGTCATTCAATGGGATATTGCAAATAGGGTGGTCTGATTTTCACAACTGCCTGCAACTGGAGAATCTCTGTTTAAAGAGCAACAAGATATTCAAAATTCCCCCACAAGCCTTCAAGGACCTCAAAAAATTACAGGTCATAGACCTTAGCAACAATGCTCTGATTACCATCCTACCAATGATGATCATAGCTCTAGAATTTCCCCATCTAGTGGTTGACTTGGCTGATAATAACTGGCAGTGTGATGATAGTGTGGCAGTCTTTCAAAATTTTATTTCTGAATCCTGGAGGAAAAAGTGGAATGTCATTTGCAACAGGTCTATAGGGAGTGAGGAGGCCAACGGGGGCACTCCCCAGAGCAGGATTTCCAGGGAAACCCGCCTTCCTCCCATTCATCTGCATCGCATGAAAAGCCTCATAAGGAGCAAAGCAGAGAGGCCCCAGGGAGGAAGGCACACGGGCATTTCTACTCTGGGGAAGAAGGCAAAGGCCGGCTCTGGTCTCAGGAAGAAGCAGAGACGGCTGCCAAGGAGTGTTAGAAGCACCCGCGATGTGCAGGCTGCCGGCAAAAAAGAGGACGCTCCCCAGGACCTGGCTCTGGCGGTGTGCCTGTCAGTGTTCATCACATTCCTTGTCGCCTTCAGCCTGGGGGCTTTCACAAGGCCTTATGTTGACAGACTGTGGCAAAAAAAGTGCCAGAGCAAAAGCCCTGGCCTGGACAACGCGTATTCAAACGAGGGCTTCTACGATGACATGGAAGCTGCGGGGCACACACCACACCCAGAGACCCATCTGCGCCAAGTATTTCCTCATCTAAGCCTCTACGAGAACCAGACCCCTTTCTGGGTGACACAGCCACACCCACACGCCACCGTAATTCCTGATAGAACTCTGGGAAGGAGCAGAAAGGATCCTGGCAGTTCGCAGAGCCCAGGACAGTGCGGGGACAACACCGGGGCAGGAAGTGGAAATGATGGTGCAGTCTATTCCATTCTCCAGAGACATCCACATGCCGGTAACCGTGAACTAATGTCAGCAGCGCAGGACCACATCCATAGGAATGATATTCTCGGAGAATGGACTTATGAAACTGTGGCCCAGGAAGAGCCTCTCAGTGCACATTCAGTGGGCGTCTCTTCTGTAGCTGGCACGTCTCACGCTGTCTCTGGCTCAAGCCGTTATGATTCCAATGAATTAGACCCTTCCCTCTCCGGAGAAATAACAGCTTCCCTCTGTAAAATGCTAACACATGCAGAAGCACAGAGGACTGGAGATAGTAAGGAAAGAGGGGGCACTGAACAGTCACTTTGGGACTCGCAGATGGAATTTTCTAAGGAAAGGCAAGTGAGTTCATCCATTGATTTGCTGAGCATACAGCAGCCAAGGCTGTCCGGGGCAAGGGCTGAGGAAGCGCTTTCAGCCCACTACAGCGAGGTTCCATACGGTGACCCAAGAGACACAGGCCCATCAGTCTTTCCTCCAAGATGGGACAGTGGCCTGGATGTCACTCCTGCTAACAAGGAACCAGTGCAGAAATCCACTCCTTCTGACACTTGCTGTGAGTTGGAGAGTGACTGTGACTCTGATGAGGGGTCTCTGTTCACTCTGAGCTCCATAAGTTCAGAGAGTGCAAGGAGCAAGACTGAAGAGGCAGTGCCTGATGAGGAGTCCCTGCAGGACGAGAGCTCAGGGGCAAGCAAGGACAATGTGACGGCTGTAGACAGTCTTGAGGAAAATGTTACCTTCCAAACAATTCCAGGGAAATGCAAGAATCAAGAAGATCCCTTTGAAAAACCTCTCATTTCTGCTCCAGACTCTGGCATGTACAAGACTCATCTGGAAAATGCCTCTGACACTGATAGATCTGAGGGCCTGTCACCCTGGCCCAGGTCACCAGGGAATAGTCCCTTAGGGGATGAGTTTCCGGGCATGTTCACTTATGATTATGACACAGCTCTTCAATCCAAGGCAGCAGAATGGCATTGCTCACTTAGAGACTTAGAATTTTCAAATGTGGACGTTTTACAGCAAACACCACCATGTTCTGCTGAAGTTCCCTCAGATCCTGATAAGGCTGCCTTCCATGAAAGAGACTCAGACATTTTAAAATAA
Amino sequence
MKNLYFRVITIVIGLYFTGIMTNASRKSNILFNSECQWNEYILTNCSFTGKCDIPVDISQTAATVDVSFNFFRVLLQSHTKKEEWKIKHLDLSNNLISKITLSPFAYLHALEVLNLSNNAIHSLSLDLLSPKSSWVKRHRSSFRNRFPLLKVLILQRNKLSDTPKGLWKLKSLQSLDLSFNGILQIGWSDFHNCLQLENLCLKSNKIFKIPPQAFKDLKKLQVIDLSNNALITILPMMIIALEFPHLVVDLADNNWQCDDSVAVFQNFISESWRKKWNVICNRSIGSEEANGGTPQSRISRETRLPPIHLHRMKSLIRSKAERPQGGRHTGISTLGKKAKAGSGLRKKQRRLPRSVRSTRDVQAAGKKEDAPQDLALAVCLSVFITFLVAFSLGAFTRPYVDRLWQKKCQSKSPGLDNAYSNEGFYDDMEAAGHTPHPETHLRQVFPHLSLYENQTPFWVTQPHPHATVIPDRTLGRSRKDPGSSQSPGQCGDNTGAGSGNDGAVYSILQRHPHAGNRELMSAAQDHIHRNDILGEWTYETVAQEEPLSAHSVGVSSVAGTSHAVSGSSRYDSNELDPSLSGEITASLCKMLTHAEAQRTGDSKERGGTEQSLWDSQMEFSKERQVSSSIDLLSIQQPRLSGARAEEALSAHYSEVPYGDPRDTGPSVFPPRWDSGLDVTPANKEPVQKSTPSDTCCELESDCDSDEGSLFTLSSISSESARSKTEEAVPDEESLQDESSGASKDNVTAVDSLEENVTFQTIPGKCKNQEDPFEKPLISAPDSGMYKTHLENASDTDRSEGLSPWPRSPGNSPLGDEFPGMFTYDYDTALQSKAAEWHCSLRDLEFSNVDVLQQTPPCSAEVPSDPDKAAFHERDSDILK*