ENST00000295213.9 SPATA18

Information
Transcript ID
ENST00000295213.9
Genome
hg19
Position
chr4:52,917,470-52,963,465
Strand
+
CDS length
1,617
Amino acid length
539
Gene symbol
SPATA18
Gene type
protein-coding
Gene description
spermatogenesis associated 18
Gene Entrez Gene ID
132671
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 52,917,470 52,917,957
2 52,926,585 52,926,690
3 52,926,948 52,927,063
4 52,928,386 52,928,498
5 52,935,987 52,936,082
6 52,938,083 52,938,322
7 52,942,945 52,943,206
8 52,944,901 52,945,059
9 52,945,910 52,946,085
10 52,948,553 52,948,676
11 52,951,082 52,951,165
12 52,960,693 52,960,738
13 52,961,046 52,963,465
CDS
Exon number Type Start Stop
1 CDS 52,917,871 52,917,957
2 CDS 52,926,585 52,926,690
3 CDS 52,926,948 52,927,063
4 CDS 52,928,386 52,928,498
5 CDS 52,935,987 52,936,082
6 CDS 52,938,083 52,938,322
7 CDS 52,942,945 52,943,206
8 CDS 52,944,901 52,945,059
9 CDS 52,945,910 52,946,085
10 CDS 52,948,553 52,948,676
11 CDS 52,951,082 52,951,165
12 CDS 52,960,693 52,960,738
13 CDS 52,961,046 52,961,053
Other genome
Genome Chromosome Start End Links
hg38 chr4 52,051,304 52,097,299 Link
CDS sequence
ATGGCGGAAAACCTGAAAAGACTGGTCTCAAACGAAACTTTACGAACGTTGCAGGAAAAGCTAGACTTCTGGCTGAAGGAGTACAACACAAACACGTGTGATCAAAATCTAAACCATTGCCTTGAACTCATTGAGCAAGTTGCCAAGGTGCAGGGACAACTCTTTGGGATCCTCACAGCAGCAGCCCAAGAAGGAGGACGTAATGATGGTGTGGAAACAATCAAGTCACGCCTTTTGCCTTGGCTGGAGGCTTCCTTTACTGCTGCTTCCCTGGGAAAATCTGTTGACAGCAAGGTCCCCTCTCTGCAGGACACGTTTGATAGGGAGAGACATAAAGATCCCAGTCCTCGGGATCGGGATATGCAACAGTTAGACTCTAATTTGAACTCAACCCGGAGTCAATGCAACCAGGTTCAAGACGATCTGGTTGAAACTGAAAAGAATCTTGAAGAAAGCAAGAACAGATCGGCCATATCCCTTTTGGCTGCAGAGGAGGAAATAAATCAGCTGAAAAAGCAGCTTAAATCTCTTCAAGCTCAGGAGGATGCCCGCCACAGAAACACAGATCAGAGGAGCTCAGAGAATAGGCGGTCAGAGCCTTGGAGCTTGGAGGAGCGGAAGCGTGAGCAGTGGAACTCACTCAAGCAGAATGCAGACCAGCAGGACACAGAAGCCATGTCCGATTATAAGAAACAGCTCCGAAACCTGAAGGAGGAGATAGCTGTTCTGTCTGCTGAGAAAAGTGCACTCCAAGGAAGGTCCTCCAGGAGCCGGTCTCCCAGCCCTGCCCCTCGCAGCCGTAGCTGCAGCCGCAGCAGATCTGCCAGCCCCTCCACCGCTGTCAAGGTCAGGAGACCGTCCCCAAACCGCTCCAAGCTGTCCAATGTGGCGCGCAAGGCTGCCCTCTTGTCCCGGTTCAGCGATTCCTATTCCCAGGCCCGCCTGGACGCGCAGTGCCTGCTGCGGCGCTGCATCGACAAGGCTGAGACCGTTCAGCGGATCATCTACATCGCCACAGTGGAGGCATTCCATGTAGCAAAAATGGCATTCAGACACTTCAAGATCCATGTGAGAAAATCGTTGACACCATCTTATGTGGGGTCGAATGACTTTGAGAATGCTGTCTTGGATTATGTCATTTGTCATCTTGATCTATATGATTCTCAAAGCAGTGTCAATGATGTGATCCGAGCCATGAATGTCAATCCCAAGATTTCATTCCCTCCTGTCGTTGACTTTTGCCTTCTCAGTGACTTCATCCAGGAGATATGTTGCATTGCCTTTGCAATGCAGGCCTTAGAACCACCCCTAGATATTGCATATGGAGCAGATGGAGAAGTTTTTAATGATTGCAAATACCGCCGCAGCTACGACTCGGATTTCACTGCTCCCTTAGTCCTCTATCACGTGTGGCCTGCTCTCATGGAGAATGACTGTGTCATTATGAAGGGAGAAGCTGTCACCAGGAGAGGGGCTTTTTGGAATTCGGTGCGATCTGTAAGTCGTTGTCGAAGCAGGAGTTTAAGTCCCATTTGCCCCCGTAGCCAAATTGGTTTAAACACGATGTCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTGGATTGCCAAGATTTTAA
Amino sequence
MAENLKRLVSNETLRTLQEKLDFWLKEYNTNTCDQNLNHCLELIEQVAKVQGQLFGILTAAAQEGGRNDGVETIKSRLLPWLEASFTAASLGKSVDSKVPSLQDTFDRERHKDPSPRDRDMQQLDSNLNSTRSQCNQVQDDLVETEKNLEESKNRSAISLLAAEEEINQLKKQLKSLQAQEDARHRNTDQRSSENRRSEPWSLEERKREQWNSLKQNADQQDTEAMSDYKKQLRNLKEEIAVLSAEKSALQGRSSRSRSPSPAPRSRSCSRSRSASPSTAVKVRRPSPNRSKLSNVARKAALLSRFSDSYSQARLDAQCLLRRCIDKAETVQRIIYIATVEAFHVAKMAFRHFKIHVRKSLTPSYVGSNDFENAVLDYVICHLDLYDSQSSVNDVIRAMNVNPKISFPPVVDFCLLSDFIQEICCIAFAMQALEPPLDIAYGADGEVFNDCKYRRSYDSDFTAPLVLYHVWPALMENDCVIMKGEAVTRRGAFWNSVRSVSRCRSRSLSPICPRSQIGLNTMSRSRSPSPIRCGLPRF*