ENST00000326902.7 GSX2
Information
- Transcript ID
- ENST00000326902.7
- Genome
- hg19
- Position
- chr4:54,966,330-54,968,665
- Strand
- +
- CDS length
- 915
- Amino acid length
- 305
- Gene symbol
- GSX2
- Gene type
- protein-coding
- Gene description
- GS homeobox 2
- Gene Entrez Gene ID
- 170825
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 54,966,330 | 54,967,085 |
| 2 | 54,967,749 | 54,968,665 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 54,966,512 | 54,967,085 |
| 2 | CDS | 54,967,749 | 54,968,089 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr4 | 54,100,163 | 54,102,498 | Link |
CDS sequence
ATGTCGCGCTCCTTCTATGTCGACTCGCTCATCATCAAGGACACCTCACGGCCTGCGCCCTCGCTGCCTGAACCGCACCCCGGGCCGGATTTCTTCATCCCGCTTGGCATGCCGCCCCCATTGGTGATGTCCGTGTCCGGCCCCGGCTGCCCGTCCCGCAAGAGCGGCGCGTTCTGCGTGTGCCCTCTCTGCGTCACTTCGCACCTGCACTCCTCTCGGGGGTCTGTGGGCGCCGGCAGCGGGGGCGCAGGGGCCGGGGTTACCGGGGCCGGAGGCAGTGGGGTGGCAGGGGCCGCAGGGGCACTGCCTCTGCTTAAGGGCCAGTTCTCTTCGGCTCCTGGGGACGCGCAGTTTTGCCCGCGGGTGAACCATGCGCATCATCACCACCACCCGCCGCAGCACCACCATCACCATCATCAGCCCCAGCAGCCTGGCTCGGCCGCGGCGGCGGCAGCAGCAGCAGCGGCGGCGGCGGCCGCGGCGGCCTTGGGGCACCCGCAGCACCACGCACCTGTCTGCACCGCCACCACCTACAACGTGGCGGACCCGCGGAGATTCCACTGCCTCACCATGGGAGGCTCTGACGCCAGCCAGGTACCCAATGGCAAGAGGATGAGGACGGCGTTCACTAGCACGCAACTCCTGGAGCTGGAGAGAGAATTCTCTTCCAACATGTACCTGTCTCGACTCCGGAGGATTGAAATCGCCACTTACCTGAACCTGTCGGAGAAGCAGGTGAAAATCTGGTTTCAGAACCGCCGAGTGAAGCACAAGAAGGAGGGGAAGGGCACGCAGAGGAACAGTCACGCGGGCTGCAAGTGCGTCGGGAGCCAGGTGCACTACGCGCGCTCCGAGGATGAGGACTCCCTGTCGCCGGCCTCAGCCAACGATGACAAGGAGATTTCCCCCTTATGA
Amino sequence
MSRSFYVDSLIIKDTSRPAPSLPEPHPGPDFFIPLGMPPPLVMSVSGPGCPSRKSGAFCVCPLCVTSHLHSSRGSVGAGSGGAGAGVTGAGGSGVAGAAGALPLLKGQFSSAPGDAQFCPRVNHAHHHHHPPQHHHHHHQPQQPGSAAAAAAAAAAAAAAAALGHPQHHAPVCTATTYNVADPRRFHCLTMGGSDASQVPNGKRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGKGTQRNSHAGCKCVGSQVHYARSEDEDSLSPASANDDKEISPL*