ENST00000509093.5 COPS4
Information
- Transcript ID
- ENST00000509093.5
- Genome
- hg19
- Position
- chr4:83,955,600-83,996,942
- Strand
- +
- CDS length
- 1,059
- Amino acid length
- 353
- Gene symbol
- COPS4
- Gene type
- protein-coding
- Gene description
- COP9 signalosome subunit 4
- Gene Entrez Gene ID
- 51138
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
1 | 83,955,600 | 83,956,451 |
2 | 83,966,779 | 83,966,858 |
3 | 83,970,319 | 83,970,470 |
4 | 83,971,034 | 83,971,137 |
5 | 83,978,079 | 83,978,232 |
6 | 83,978,411 | 83,978,561 |
7 | 83,984,229 | 83,984,399 |
8 | 83,987,591 | 83,987,706 |
9 | 83,996,450 | 83,996,942 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
1 | CDS | 83,956,378 | 83,956,451 |
2 | CDS | 83,966,779 | 83,966,858 |
3 | CDS | 83,970,319 | 83,970,470 |
4 | CDS | 83,971,034 | 83,971,137 |
5 | CDS | 83,978,079 | 83,978,232 |
6 | CDS | 83,978,411 | 83,978,561 |
7 | CDS | 83,984,229 | 83,984,399 |
8 | CDS | 83,987,591 | 83,987,706 |
9 | CDS | 83,996,450 | 83,996,506 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg38 | chr4 | 83,034,447 | 83,075,789 | Link |
CDS sequence
ATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCTCTCATAAAGATCTGGCTGGCAAGTATCGTCAGATCCTGGAAAAAGCCATTCAGTTATCTGGAGCAGAACAACTAGAAGCTTTGAAAGCTTTTGTGGAAGCAATGGTAAATGAGAATGTCAGTCTCGTGATCTCGCGGCAGTTGCTGACTGATTTTTGCACACATCTTCCTAACTTGCCTGATAGCACAGCCAAAGAAATCTATCACTTCACCTTGGAAAAGATCCAGCCTAGAGTCATTTCATTTGAGGAGCAGGTTGCTTCCATAAGACAGCATCTTGCATCTATATATGAGAAAGAAGAAGATTGGAGAAATGCAGCCCAAGTGTTGGTGGGAATTCCTTTGGAAACAGGACAAAAACAGTACAATGTAGATTATAAACTGGAGACTTACTTGAAGATTGCTAGGCTATATCTGGAGGATGATGATCCAGTCCAGGCAGAGGCTTACATAAATCGAGCATCGTTGCTTCAGAATGAATCAACCAATGAACAATTACAGATACATTATAAGGTATGCTATGCACGTGTTCTTGATTATAGAAGAAAATTCATTGAAGCTGCACAAAGGTACAATGAGCTCTCTTACAAGACAATAGTCCACGAAAGTGAAAGACTAGAGGCCTTAAAACATGCTTTGCACTGTACGATCTTAGCATCAGCAGGGCAGCAGCGTTCTCGGATGCTAGCTACTCTTTTTAAGGATGAAAGGTGCCAGCAACTTGCTGCCTATGGGATCCTAGAGAAAATGTATCTAGATAGGATCATCAGAGGAAATCAACTTCAAGAATTTGCTGCCATGCTGATGCCTCACCAAAAAGCAACTACAGCTGATGGTTCCAGCATCTTGGACAGAGCTGTTATTGAACACAATTTGTTGTCTGCAAGCAAATTATATAATAATATTACCTTCGAAGAACTTGGAGCTCTTTTAGAGATCCCTGCAGCTAAGCACGAGAAGCCCTGCCAACGTGGGATAAGCAGATCCAATCACTTTGTTTCCAAGTGA
Amino sequence
MAAAVRQDLAQLMNSSGSHKDLAGKYRQILEKAIQLSGAEQLEALKAFVEAMVNENVSLVISRQLLTDFCTHLPNLPDSTAKEIYHFTLEKIQPRVISFEEQVASIRQHLASIYEKEEDWRNAAQVLVGIPLETGQKQYNVDYKLETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNEQLQIHYKVCYARVLDYRRKFIEAAQRYNELSYKTIVHESERLEALKHALHCTILASAGQQRSRMLATLFKDERCQQLAAYGILEKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKHEKPCQRGISRSNHFVSK*