ENST00000457823.6 SMARCAD1

Information
Transcript ID
ENST00000457823.6
Genome
hg19
Position
chr4:95,128,996-95,211,972
Strand
+
CDS length
3,087
Amino acid length
1,029
Gene symbol
SMARCAD1
Gene type
protein-coding
Gene description
SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
Gene Entrez Gene ID
56916
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 95,128,996 95,129,221
2 95,129,497 95,129,735
3 95,147,270 95,147,447
4 95,155,105 95,155,273
5 95,158,103 95,158,169
6 95,162,057 95,162,157
7 95,170,805 95,170,906
8 95,171,903 95,171,984
9 95,173,767 95,174,158
10 95,185,858 95,186,057
11 95,191,879 95,191,969
12 95,194,768 95,194,867
13 95,195,889 95,195,948
14 95,196,041 95,196,116
15 95,197,490 95,197,625
16 95,198,173 95,198,310
17 95,199,573 95,199,668
18 95,199,767 95,199,884
19 95,200,074 95,200,201
20 95,201,743 95,201,931
21 95,202,623 95,202,741
22 95,204,272 95,204,454
23 95,206,111 95,206,220
24 95,210,624 95,211,972
CDS
Exon number Type Start Stop
2 CDS 95,129,546 95,129,735
3 CDS 95,147,270 95,147,447
4 CDS 95,155,105 95,155,273
5 CDS 95,158,103 95,158,169
6 CDS 95,162,057 95,162,157
7 CDS 95,170,805 95,170,906
8 CDS 95,171,903 95,171,984
9 CDS 95,173,767 95,174,158
10 CDS 95,185,858 95,186,057
11 CDS 95,191,879 95,191,969
12 CDS 95,194,768 95,194,867
13 CDS 95,195,889 95,195,948
14 CDS 95,196,041 95,196,116
15 CDS 95,197,490 95,197,625
16 CDS 95,198,173 95,198,310
17 CDS 95,199,573 95,199,668
18 CDS 95,199,767 95,199,884
19 CDS 95,200,074 95,200,201
20 CDS 95,201,743 95,201,931
21 CDS 95,202,623 95,202,741
22 CDS 95,204,272 95,204,454
23 CDS 95,206,111 95,206,220
24 CDS 95,210,624 95,210,685
Other genome
Genome Chromosome Start End Links
hg38 chr4 94,207,845 94,290,821 Link
CDS sequence
ATGAATCTTTTCAACCTGGACCGTTTTCGCTTTGAGAAAAGGAATAAGATTGAGGAAGCGCCCGAAGCAACCCCTCAACCTTCCCAGCCTGGCCCTTCTTCACCAATTTCTCTTAGTGCTGAAGAGGAGAATGCTGAAGGGGAAGTTAGCAGGGCAAACACTCCTGATTCAGATATAACTGAAAAAACAGAAGATTCTAGTGTTCCAGAAACTCCAGATAATGAAAGAAAAGCAAGTATATCATATTTCAAAAATCAAAGAGGAATACAGTATATTGATTTGTCTTCTGATAGTGAAGATGTCGTTTCCCCAAATTGCTCCAATACAGTTCAAGAGAAAACATTCAACAAAGATACAGTGATTATAGTTTCTGAGCCATCTGAAGATGAAGAGTCCCAAGGCCTTCCTACCATGGCACGTAGAAATGATGATATTTCAGAACTGGAAGACCTTTCGGAATTGGAAGACCTTAAAGATGCTAAACTTCAGACTTTGAAGGAACTTTTTCCACAAAGAAGTGACAATGATTTACTTAAGTTGATTGAATCAACAAGCACTATGGATGGAGCAATTGCTGCTGCCTTGCTGATGTTTGGTGATGCAGGTGGTGGGCCCAGGAAAAGAAAATTATCTTCTTCTTCAGAGCCATATGAGGAAGATGAATTTAATGATGATCAATCTATAAAAAAGACAAGACTGGATCATGGAGAGGAATCAAATGAGTCTGCAGAATCTAGCAGTAATTGGGAAAAGCAGGAAAGTATTGTACTGAAATTGCAAAAGGAATTTCCCAATTTTGATAAACAGGAACTTAGAGAAGTACTCAAGGAACATGAATGGATGTACACAGAAGCTTTAGAATCTCTAAAAGTGTTTGCAGAAGACCAAGATATGCAATATGTATCACAAAGTGAGGTTCCAAATGGAAAAGAAGTTTCTTCAAGAAGTCAAAATTACCCTAAAAATGCAACTAAAACAAAACTAAAACAGAAATTTTCAATGAAAGCACAAAATGGCTTTAACAAGAAACGTAAAAAAAATGTTTTTAATCCAAAGAGAGTTGTTGAAGACTCTGAATATGATTCAGGTTCTGATGTCGGTAGTTCACTAGATGAGGACTATAGTAGTGGTGAAGAAGTGATGGAGGATGGCTATAAAGGTAAAATTCTTCACTTCCTTCAAGATGCTTCAATTGGTGAACTTACTTTGATTCCTCAGTGTTCTCAGAAAAAGGCTCAGAAGATAACAGAACTCCGGCCCTTTAATAGTTGGGAGGCTCTGTTCACAAAGATGTCCAAAACTAATGGCTTATCAGAAGATTTGATATGGCACTGTAAAACACTGATCCAAGAAAGAGATGTAGTTATAAGGCTTATGAACAAATGTGAAGACATTTCAAATAAATTGACCAAACAAGTTACCATGCTTACTGGAAATGGAGGTGGATGGAACATAGAACAACCTTCCATTCTAAACCAAAGTTTGTCACTCAAGCCCTATCAGAAGGTTGGTTTGAATTGGCTGGCATTGGTACATAAACATGGACTTAATGGCATTTTGGCAGATGAAATGGGCCTAGGAAAAACTATTCAAGCCATTGCATTTCTGGCATACCTCTATCAGGAGGGTAATAATGGTCCTCATTTGATCGTTGTTCCAGCTTCAACTATAGATAACTGGTTAAGGGAAGTTAATTTATGGTGCCCTACTTTGAAGGTCCTCTGTTACTATGGTTCTCAAGAAGAACGTAAACAAATTAGATTTAACATTCATAGTAGATATGAAGATTACAATGTAATTGTGACCACATATAACTGTGCGATCAGCAGTTCTGATGACCGTAGTCTGTTTCGACGGCTGAAACTTAATTACGCAATTTTTGATGAGGGCCATATGCTGAAGAATATGGGCTCCATTCGCTACCAGCACCTTATGACAATTAATGCAAATAACCGTTTGCTGCTCACAGGCACACCTGTACAGAACAATCTGTTAGAACTCATGTCGCTGTTGAATTTTGTTATGCCACACATGTTTAGTAGTAGCACCAGTGAAATACGAAGAATGTTTTCCTCTAAGACAAAATCAGCAGATGAGCAAAGCATATATGAAAAGGAGAGAATAGCACATGCAAAACAAATTATAAAGCCATTTATTCTCAGAAGAGTAAAAGAAGAGGTTCTCAAGCAGTTACCCCCCAAGAAAGATCGAATTGAGTTGTGTGCAATGTCGGAGAAGCAGGAGCAACTCTATTTGGGTCTTTTCAACAGATTGAAAAAATCTATCAATAACTTGGTCACAGAAAAAAACACAGAAATGTGCAATGTCATGATGCAGTTGAGGAAAATGGCCAATCATCCTTTATTACATCGCCAATATTACACAGCTGAAAAACTCAAGGAAATGTCTCAGCTTATGCTAAAGGAACCTACACATTGTGAGGCTAACCCTGACCTGATCTTTGAAGATATGGAAGTTATGACAGACTTCGAACTACATGTACTTTGTAAACAGTACCGACACATTAATAACTTTCAGTTAGACATGGACTTGATTTTAGATTCTGGAAAATTTCGAGTTTTAGGATGCATCTTGTCTGAATTGAAACAGAAGGGTGATAGAGTTGTGTTATTTAGCCAATTTACCATGATGCTGGATATCTTAGAGGTTCTATTAAAACATCATCAGCATAGGTACCTCAGATTAGATGGAAAGACTCAGATTTCTGAAAGGATTCATCTAATTGATGAGTTTAATACCGATATGGATATCTTTGTGTTTCTGCTATCAACAAAAGCTGGTGGATTAGGAATAAATCTGACTTCAGCAAATGTTGTTATACTTCACGATATTGACTGTAATCCTTATAATGACAAACAAGCAGAAGATAGATGCCATAGAGTAGGCCAGACTAAAGAAGTACTAGTTATAAAACTAATAAGCCAAGGGACGATTGAAGAATCCATGCTAAAAATTAACCAACAGAAATTGAAACTAGAACAGGATATGACTACAGTAGATGAAGGTGATGAAGGGAGTATGCCAGCAGATATAGCCACATTACTAAAAACATCAATGGGCCTGTGA
Amino sequence
MNLFNLDRFRFEKRNKIEEAPEATPQPSQPGPSSPISLSAEEENAEGEVSRANTPDSDITEKTEDSSVPETPDNERKASISYFKNQRGIQYIDLSSDSEDVVSPNCSNTVQEKTFNKDTVIIVSEPSEDEESQGLPTMARRNDDISELEDLSELEDLKDAKLQTLKELFPQRSDNDLLKLIESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQSIKKTRLDHGEESNESAESSSNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALESLKVFAEDQDMQYVSQSEVPNGKEVSSRSQNYPKNATKTKLKQKFSMKAQNGFNKKRKKNVFNPKRVVEDSEYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITELRPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNKLTKQVTMLTGNGGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGNNGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNLVTEKNTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGSMPADIATLLKTSMGL*