ENST00000280551.11 SEC24D

Information
Transcript ID
ENST00000280551.11
Genome
hg19
Position
chr4:119,643,978-119,757,281
Strand
-
CDS length
3,099
Amino acid length
1,033
Gene symbol
SEC24D
Gene type
protein-coding
Gene description
SEC24 homolog D, COPII coat complex component
Gene Entrez Gene ID
9871
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
23 119,643,978 119,644,810
22 119,649,716 119,649,805
21 119,652,471 119,652,662
20 119,653,888 119,654,067
19 119,659,416 119,659,534
18 119,660,304 119,660,442
17 119,661,818 119,661,963
16 119,662,096 119,662,192
15 119,665,143 119,665,313
14 119,666,099 119,666,215
13 119,673,151 119,673,244
12 119,673,852 119,674,043
11 119,678,876 119,679,000
10 119,685,957 119,686,072
9 119,689,328 119,689,466
8 119,718,838 119,718,965
7 119,726,998 119,727,109
6 119,736,183 119,736,310
5 119,736,606 119,736,881
4 119,738,419 119,738,567
3 119,745,775 119,745,904
2 119,754,734 119,754,892
1 119,757,096 119,757,281
CDS
Exon number Type Start Stop
23 CDS 119,644,670 119,644,810
22 CDS 119,649,716 119,649,805
21 CDS 119,652,471 119,652,662
20 CDS 119,653,888 119,654,067
19 CDS 119,659,416 119,659,534
18 CDS 119,660,304 119,660,442
17 CDS 119,661,818 119,661,963
16 CDS 119,662,096 119,662,192
15 CDS 119,665,143 119,665,313
14 CDS 119,666,099 119,666,215
13 CDS 119,673,151 119,673,244
12 CDS 119,673,852 119,674,043
11 CDS 119,678,876 119,679,000
10 CDS 119,685,957 119,686,072
9 CDS 119,689,328 119,689,466
8 CDS 119,718,838 119,718,965
7 CDS 119,726,998 119,727,109
6 CDS 119,736,183 119,736,310
5 CDS 119,736,606 119,736,881
4 CDS 119,738,419 119,738,567
3 CDS 119,745,775 119,745,904
2 CDS 119,754,734 119,754,851
Other genome
Genome Chromosome Start End Links
hg38 chr4 118,722,823 118,836,126 Link
CDS sequence
ATGAGTCAACAAGGTTACGTGGCTACACCTCCGTATTCTCAGCCTCAGCCTGGAATAGGCCTTTCTCCACCTCATTATGGGCACTATGGGGATCCGTCGCACACAGCATCTCCAACAGGTATGATGAAGCCAGCAGGGCCTTTGGGGGCCACCGCCACTAGGGGAATGTTGCCTCCGGGTCCCCCACCTCCTGGACCCCATCAGTTTGGTCAGAATGGAGCTCATGCCACTGGTCACCCTCCCCAAAGATTTCCAGGCCCTCCACCTGTCAACAATGTGGCATCCTCACATGCACCATACCAACCCTCTGCACAATCTTCTTATCCAGGTCCTATATCCACTTCATCTGTCACCCAGCTGGGCAGCCAGCTCAGTGCTATGCAAATCAACAGCTATGGTTCAGGCATGGCTCCTCCAAGCCAGGGACCCCCTGGCCCTCTGTCAGCCACATCATTGCAGACTCCTCCACGACCTCCACAGCCTTCCATTTTGCAGCCTGGATCTCAAGTTCTTCCACCACCACCCACCACACTCAATGGTCCTGGTGCCTCACCTTTGCCTCTACCAATGTACAGACCAGATGGGCTCTCTGGGCCTCCTCCTCCAAATGCCCAGTACCAGCCCCCACCTCTTCCAGGCCAGACCTTGGGTGCTGGATATCCTCCGCAGCAGGCCAACTCTGGTCCCCAGATGGCAGGCGCACAACTGTCTTACCCAGGAGGCTTCCCTGGAGGTCCTGCACAGATGGCTGGTCCGCCACAGCCCCAGAAGAAGCTGGATCCTGACTCTATCCCTAGCCCAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATCCCTCCCCTGGTCACTACAGATTGCATGATACAAGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTCAGATATGGCTAAGCAAGCTCAGATTCCATTAGCTGCTGTCATCAAGCCCTTTGCCACCATTCCTTCAAATGAGAGTCCCCTTTACTTGGTAAATCACGGCGAGAGTGGACCAGTCAGATGCAACAGGTGCAAGGCCTACATGTGCCCATTTATGCAGTTCATCGAAGGAGGAAGGAGATATCAGTGTGGATTTTGCAACTGTGTGAATGATGTTCCACCATTCTATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAACCAGAGTTATCTCTAGGATCTTATGAATATGTTGCCACTTTGGATTATTGCAGAAAGAGTAAGCCTCCCAACCCACCAGCCTTTATCTTCATGATTGATGTTTCATATAGTAACATAAAGAATGGACTTGTCAAGCTCATATGTGAAGAACTGAAGACCATGCTGGAAAAAATTCCAAAGGAAGAGCAAGAAGAGACGTCTGCAATTCGAGTGGGTTTTATCACATATAACAAAGTTCTCCATTTCTTTAATGTGAAGAGTAATCTGGCCCAGCCTCAGATGATGGTGGTGACTGATGTTGGAGAAGTCTTTGTTCCTTTGTTGGATGGTTTCCTTGTCAACTATCAAGAATCCCAATCTGTGATTCATAATTTGTTGGACCAGATTCCAGACATGTTTGCAGACTCTAATGAAAATGAGACTGTCTTTGCTCCTGTCATCCAGGCTGGCATGGAAGCACTAAAGGCAGCAGACTGTCCTGGGAAGCTGTTCATCTTCCATTCTTCCTTGCCAACTGCTGAAGCACCAGGGAAGCTCAAAAACAGAGATGACAAAAAACTGGTTAATACAGACAAAGAGAAGATACTTTTCCAGCCCCAAACAAATGTCTATGACTCATTGGCCAAGGACTGCGTGGCTCACGGCTGCTCTGTGACACTCTTCCTCTTTCCTAGTCAGTATGTGGACGTGGCCTCGCTGGGGCTGGTTCCTCAGCTCACTGGAGGAACCCTTTACAAATACAACAATTTCCAGATGCACTTGGATAGACAACAATTTTTGAACGACCTCAGAAATGATATTGAAAAGAAAATAGGCTTTGATGCTATTATGAGGGTTCGTACCAGCACAGGTTTCAGAGCCACTGATTTCTTTGGTGGAATCTTGATGAACAACACCACCGATGTAGAAATGGCTGCCATCGATTGTGACAAGGCAGTGACCGTGGAGTTCAAGCACGATGACAAACTCAGTGAAGACAGTGGAGCCTTAATCCAGTGTGCTGTGCTTTACACGACAATCAGTGGTCAAAGAAGACTTCGGATTCACAATCTTGGCTTAAACTGCAGCTCTCAGCTAGCTGATCTTTATAAGAGCTGTGAGACAGATGCTCTTATCAACTTCTTTGCCAAGTCAGCTTTTAAAGCAGTTCTCCACCAGCCTTTGAAGGTCATCCGGGAAATTCTAGTTAATCAGACTGCCCATATGTTGGCATGTTACCGGAAGAATTGTGCAAGTCCTTCTGCAGCAAGCCAGCTTATTCTACCAGATTCCATGAAAGTATTGCCAGTGTACATGAATTGCTTGTTGAAAAACTGTGTACTACTCAGCAGACCAGAGATCTCAACTGATGAACGAGCATACCAGAGACAGCTGGTCATGACCATGGGTGTGGCTGACTCTCAGCTTTTCTTCTACCCACAACTTCTGCCCATACACACGTTAGATGTCAAGAGTACAATGTTACCTGCTGCCGTTCGTTGCTCTGAGTCCCGTCTTTCAGAAGAAGGAATATTCTTACTGGCTAATGGTCTACACATGTTCCTGTGGTTGGGAGTAAGCAGCCCACCAGAACTGATCCAAGGAATATTTAATGTGCCATCTTTTGCACATATCAACACAGATATGACATTGCTGCCTGAAGTGGGAAACCCATACTCTCAACAACTCAGAATGATAATGGGTATTATCCAACAAAAGAGGCCATATTCAATGAAGCTCACAATTGTAAAGCAGCGAGAACAACCAGAAATGGTTTTCCGACAGTTCCTGGTAGAAGACAAAGGACTTTACGGAGGCTCTTCTTATGTGGATTTCCTTTGTTGTGTTCACAAGGAGATCTGTCAGCTGCTTAATTAA
Amino sequence
MSQQGYVATPPYSQPQPGIGLSPPHYGHYGDPSHTASPTGMMKPAGPLGATATRGMLPPGPPPPGPHQFGQNGAHATGHPPQRFPGPPPVNNVASSHAPYQPSAQSSYPGPISTSSVTQLGSQLSAMQINSYGSGMAPPSQGPPGPLSATSLQTPPRPPQPSILQPGSQVLPPPPTTLNGPGASPLPLPMYRPDGLSGPPPPNAQYQPPPLPGQTLGAGYPPQQANSGPQMAGAQLSYPGGFPGGPAQMAGPPQPQKKLDPDSIPSPIQVIENDRASRGGQVYATNTRGQIPPLVTTDCMIQDQGNASPRFIRCTTYCFPCTSDMAKQAQIPLAAVIKPFATIPSNESPLYLVNHGESGPVRCNRCKAYMCPFMQFIEGGRRYQCGFCNCVNDVPPFYFQHLDHIGRRLDHYEKPELSLGSYEYVATLDYCRKSKPPNPPAFIFMIDVSYSNIKNGLVKLICEELKTMLEKIPKEEQEETSAIRVGFITYNKVLHFFNVKSNLAQPQMMVVTDVGEVFVPLLDGFLVNYQESQSVIHNLLDQIPDMFADSNENETVFAPVIQAGMEALKAADCPGKLFIFHSSLPTAEAPGKLKNRDDKKLVNTDKEKILFQPQTNVYDSLAKDCVAHGCSVTLFLFPSQYVDVASLGLVPQLTGGTLYKYNNFQMHLDRQQFLNDLRNDIEKKIGFDAIMRVRTSTGFRATDFFGGILMNNTTDVEMAAIDCDKAVTVEFKHDDKLSEDSGALIQCAVLYTTISGQRRLRIHNLGLNCSSQLADLYKSCETDALINFFAKSAFKAVLHQPLKVIREILVNQTAHMLACYRKNCASPSAASQLILPDSMKVLPVYMNCLLKNCVLLSRPEISTDERAYQRQLVMTMGVADSQLFFYPQLLPIHTLDVKSTMLPAAVRCSESRLSEEGIFLLANGLHMFLWLGVSSPPELIQGIFNVPSFAHINTDMTLLPEVGNPYSQQLRMIMGIIQQKRPYSMKLTIVKQREQPEMVFRQFLVEDKGLYGGSSYVDFLCCVHKEICQLLN*