ENST00000511115.5 PCDH18

Information
Transcript ID
ENST00000511115.5
Genome
hg19
Position
chr4:138,441,992-138,453,630
Strand
-
CDS length
948
Amino acid length
316
Gene symbol
PCDH18
Gene type
protein-coding
Gene description
protocadherin 18
Gene Entrez Gene ID
54510
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
4 138,441,992 138,442,850
3 138,449,632 138,449,795
2 138,449,886 138,449,971
1 138,453,409 138,453,630
CDS
Exon number Type Start Stop
4 CDS 138,442,183 138,442,850
3 CDS 138,449,632 138,449,795
2 CDS 138,449,886 138,449,971
1 CDS 138,453,409 138,453,438
Other genome
Genome Chromosome Start End Links
hg38 chr4 137,520,838 137,532,476 Link
CDS sequence
ATGCCGAAGGTATCTGGAAGTCGTGACACGGTCTCTCAGCTTCTTTCAATGCTTCACCAGGGGCAATATCAGCCAAGACCAAGTTTTCGAGGAAACAAATATTCCAGGAGCTACAGATATGCCCTTCAAGACATGGACAAATTTAGCTTGAAAGACAGTGGCCGTGGTGACAGTGAGGCAGGAGACAGTGATTATGATTTGGGGCGAGATTCTCCAATAGATAGGCTGTTGGGTGAAGGATTCAGCGACCTGTTTCTCACAGATGGAAGAATTCCAGCAGCTATGAGACTCTGCACGGAGGAGTGCAGGGTCCTGGGACACTCTGACCAGTGCTGGATGCCACCACTGCCCTCACCGTCTTCTGATTATAGGAGTAACATGTTCATTCCAGGGGAAGAATTCCCAACGCAACCCCAGCAGCAGCATCCACATCAGAGTCTTGAGGATGACGCTCAGCCTGCAGATTCCGGTGAAAAGAAGAAGAGTTTTTCCACCTTTGGAAAGGACTCCCCAAACGATGAGGACACTGGGGATACCAGCACATCATCTCTGCTCTCGGAAATGAGCAGTGTGTTCCAGCGTCTCTTACCGCCTTCCCTGGACACCTATTCTGAATGCAGTGAGGTGGATCGGTCCAACTCCCTGGAGCGCAGGAAGGGACCCTTGCCAGCCAAAACTGTGGGTTACCCACAGGGGGTAGCGGCATGGGCAGCCAGTACGCATTTTCAAAATCCCACCACCAACTGTGGGCCGCCACTTGGAACTCACTCCAGTGTGCAGCCTTCTTCAAAATGGCTGCCAGCCATGGAGGAGATCCCTGAAAATTATGAGGAAGATGATTTTGACAATGTGCTCAACCACCTCAATGATGGGAAACACGAACTCATGGATGCCAGTGAACTGGTGGCAGAGATTAACAAACTGCTTCAAGATGTCCGCCAGAGCTAG
Amino sequence
MPKVSGSRDTVSQLLSMLHQGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEGFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPTQPQQQHPHQSLEDDAQPADSGEKKKSFSTFGKDSPNDEDTGDTSTSSLLSEMSSVFQRLLPPSLDTYSECSEVDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTTNCGPPLGTHSSVQPSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS*