ENST00000393820.2 NPM1
Information
- Transcript ID
- ENST00000393820.2
- Genome
- hg19
- Position
- chr5:170,814,855-170,834,129
- Strand
- +
- CDS length
- 780
- Amino acid length
- 260
- Gene symbol
- NPM1
- Gene type
- protein-coding
- Gene description
- nucleophosmin 1
- Gene Entrez Gene ID
- 4869
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 170,814,855 | 170,815,010 |
| 2 | 170,817,055 | 170,817,134 |
| 3 | 170,818,309 | 170,818,428 |
| 4 | 170,818,710 | 170,818,803 |
| 5 | 170,819,714 | 170,819,820 |
| 6 | 170,819,918 | 170,819,982 |
| 7 | 170,827,157 | 170,827,214 |
| 8 | 170,827,843 | 170,827,929 |
| 9 | 170,832,306 | 170,832,407 |
| 10 | 170,833,401 | 170,834,129 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 170,814,953 | 170,815,010 |
| 2 | CDS | 170,817,055 | 170,817,134 |
| 3 | CDS | 170,818,309 | 170,818,428 |
| 4 | CDS | 170,818,710 | 170,818,803 |
| 5 | CDS | 170,819,714 | 170,819,820 |
| 6 | CDS | 170,819,918 | 170,819,982 |
| 7 | CDS | 170,827,157 | 170,827,214 |
| 8 | CDS | 170,827,843 | 170,827,929 |
| 9 | CDS | 170,832,306 | 170,832,407 |
| 10 | CDS | 170,833,401 | 170,833,409 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr5 | 171,387,851 | 171,407,125 | Link |
CDS sequence
ATGGAAGATTCGATGGACATGGACATGAGCCCCCTGAGGCCCCAGAACTATCTTTTCGGTTGTGAACTAAAGGCCGACAAAGATTATCACTTTAAGGTGGATAATGATGAAAATGAGCACCAGTTATCTTTAAGAACGGTCAGTTTAGGGGCTGGTGCAAAGGATGAGTTGCACATTGTTGAAGCAGAGGCAATGAATTACGAAGGCAGTCCAATTAAAGTAACACTGGCAACTTTGAAAATGTCTGTACAGCCAACGGTTTCCCTTGGGGGCTTTGAAATAACACCACCAGTGGTCTTAAGGTTGAAGTGTGGTTCAGGGCCAGTGCATATTAGTGGACAGCACTTAGTAGCTGTGGAGGAAGATGCAGAGTCAGAAGATGAAGAGGAGGAGGATGTGAAACTCTTAAGTATATCTGGAAAGCGGTCTGCCCCTGGAGGTGGTAGCAAGGTTCCACAGAAAAAAGTAAAACTTGCTGCTGATGAAGATGATGACGATGATGATGAAGAGGATGATGATGAAGATGATGATGATGATGATTTTGATGATGAGGAAGCTGAAGAAAAAGCGCCAGTGAAGAAATCTATACGAGATACTCCAGCCAAAAATGCACAAAAGTCAAATCAGAATGGAAAAGACTCAAAACCATCATCAACACCAAGATCAAAAGGACAAGAATCCTTCAAGAAACAGGAAAAAACTCCTAAAACACCAAAAGGACCTAGTTCTGTAGAAGACATTAAAGCAAAAATGCAAGCAAGTATAGAAAAAGCGCATTGA
Amino sequence
MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVEEDAESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVKLAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKAH*