ENST00000646382.1 SCAND3

Information
Transcript ID
ENST00000646382.1
Genome
hg19
Position
chr6:28,538,312-28,565,807
Strand
-
CDS length
3,525
Amino acid length
1,175
Gene symbol
SCAND3
Gene type
protein-coding
Gene description
SCAN domain containing 3
Gene Entrez Gene ID
114821
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 28,538,312 28,541,604
4 28,542,421 28,543,913
3 28,547,049 28,547,196
2 28,561,327 28,561,424
1 28,565,501 28,565,807
CDS
Exon number Type Start Stop
5 CDS 28,539,688 28,541,604
4 CDS 28,542,421 28,543,913
3 CDS 28,547,049 28,547,163
Other genome
Genome Chromosome Start End Links
hg38 chr6 28,570,535 28,598,030 Link
CDS sequence
ATGGAAGAAATGATCCCTCTGGATTCTGCAAAGGAGTCTTTAGGCACCCAGCTTCAGTCTATGGAAGATAGAATGGAATGTGAATCTCCAGAGCCACACCCACTTCAAGATAATGGGTCATTTTTGTGGTTTTCCATGATGTCTCAAAGCATGGGTGGTGATAACCTCAGTAGCTTAGATACTAATGAAGCAGAAATTGAACCAGAAAACATGAGAGAAAAGTTCTTCAGAAGCTTAGCAAGGTTACTGGAAAACAAAAGTAATAATACTAAGATATTTTCTAAAGCAAAGTACTGTCAGTTGATAAAGGAAGTGAAAGAAGCTAAAGCTAAGGCGAAAAAGGAATCAGTTGACTACCGTCGCTTGGCTAGATTTGATGTTATCCTTGTACAAGGAAATGAGAAGCTAATTGAGGCTGTAAATGGGGAAACAGATAAAATACGGTATTACTTACACAGTGAGGACTTATTTGACATTCTGCATAATACACATCTCAGCATTGGACATGGTGGACGTACTCGCATGGAGAAAGAGTTACAAGCGAAATACAAGAACATCACAAAAGAAGTTATAATGCTGTATCTGACCCTCTGTAAACCATGCCAACAGAAAAATTCAAAACTCAAGAAGGTTCTAACATCAAAATCAATTAAGGAAGTTAGTTCAAGATGCCAAGTAGATCTTATAGACATGCAGTTGAATCCTGATGGGGAGTACAGATTTATTTTGCATTATCAAGATCTCTGTACAAAGTTAACTTTTTTGCGGTCATTAAAGTCTAAAAGGCCTACGGAAGTTGCACATGCTCTTTTAGATATATTTACAATTATTGGAGCACCCAGTGTCCTACAATCTGACAATGGGAGGGAATTTTCAAGCCAGGTTGTCAGTGAACTCAGTAATATTTGGCCAGAATTGAAAATTGTCCATGGGAAGTCTCAGACCTGCCAAAGCCAGAGTTCTGCAGAACAAACTGAGGATATCCGAAAGAGGATTTTCTCCTGGATGCAAACTAACAACTCATCACACTGGACTGAATTTTTGTGGTTCATTCAGATGTCCCAAAATCAGCCCTATCACAGAAGCATGCAACAGACTCCATGTGAAAGTGCATTTAGCTCTGAAGCTAAACTGGGCTTGTCCCATTCTCAGCTAACTGAAGAACTTGTTGCCAGCTTGCATACAGAAAATGAATTAGATCAGGCTGACAAAGAGTTAGAAAATACTTTAAGAGCCCAGTATGAAGAAAACATTGAGACTGGAACAGACAGTAGTGATATTGAAGAGAATCTTTCTGTCACTCCTAAGGTGGCTGAAAAAAGCCCTCCTGAGAGCAGACTAAGATTTTTATCCTGTGTAGTTTGTGAAAAAGAATGCACAGGTGTTAATAGTTGTATATCATGTGATGGAAATATCCATGCAATTTGTGGAGTGCCCTCTCAACATGGGACTGAGGGCTGTGGTCGGCAAATAACTTGTAGCCTTTGCTATGAAACCAGCACAATGAAGAGGAAACATGATGAGATTCAAAGAAGTTTGCCTGTTAAACCTTCCAAAATGCTAAAGCCATCAGGGACACCATTTTCACCAGACAAAGTAGGAGACTGGATGGCGAAACAAGCTTCACTGGACTTTTTTGTCAAGAAAAGACATGCCTTTTCTGAACACAGTAGTAGTAATAAAAGAAATGTTAACAATAGAAGTTATCCTGAAGAAGGGAAAACCAAAAGAGTTCATGCTAGTTTCACTCGGAAATATGATCCTTCATATATTGAGTTTGGTTTTGTAGCTGTAATTGATGGTGAAGTACTAAAACCACAGTGTATTATTTGTGGAGATGTACTGGCTAATGAAGCAATGAAACCATCAAAACTTAAGCGACATTTATATTCAAAACATAAAGAAATAAGTTCACAACCAAAAGAATTCTTTGAAAGAAAGAGTAGTGAATTGAAAAGCCAACCAAAGCAGGTGTTCAACGTTTCTCATATAAACATTAGTGCTTTGCGGGCTTCATATAAAGTAGCACTTCCGGTTGCCAAGTCTAAAACACCATACACAATTGCTGAGACACTAGTGAAAGACTGCATCAAAGAAGTTTGCTTGGAAATGTTGGGTGAATCTGCAGCAAAGAAGGTAGCTCAGGTACCACTTTCCAATGACACCATAGCTCGACGTATTCAGGAACTGGCTAATGATATGGAAGATCAACTCATAGAACAAATAAAACTAGCAAAGTATTTTTCATTGCAACTTGATGAATGCAGAGATATTGCTAACATGATAATTCTTTTAGTCTATGTGAGGTTTGAACATGATGATGATATAAAGGAAGAGTTCTTTTTTTCAGCCTCTTTGCCTACAAACACAACTAGCTCAGAACTGTATGAAGCTGTAAAGAATTATATTGTTAACAAATGTGGTTTGGAATTTAAATTTTGTGTAGGAGTATGTTCTGATGGTGCAGCTTCAATGACAGGAAAACATTCTGAAGTGGTAACCCAGATTAAGGAACTTGCGCCAGAATGTAAAACAACACATTGCTTCATTCATCGAGAAAGTCTTGCCATGAAAAAAATATCAGCTGAACTAAATAGTGTACTTAATGATATAGTAAAAATTGTGAATTATATAAAATCTAATTCATTGAATTCAAGATTATTCTCTTTATTATGTGATAATATGGAAGCTGATCATAAGCAACTGTTACTGCATGCTGAGATACGGTGGTTATCACGGGGAAAAGTTCTGTCAAGAATGTTTGAAATACGAAATGAACTCTTAGTGTTTCTGCAAGGCAAGAAACCCATGTGGTCCCAACTTTTTAAAGATGTGAATTGGACAGCCAGACTTGCTTATTTGTCTGATATCTTCAGTATTTTTAATGATCTTAATGCTTCTATGCAAGGGAAGAATGCAACTTATTTTTCAATGGCAGATAAAGTTGAAGGACAAAAACAGAAGTTAGAAGCTTGGAAAAACAGAATTTCTACAGATTGTTATGACATGTTTCATAATTTAACAACAATTATCAATGAAGTAGGTAATGATCTTGATATTGCACATCTGCGAAAAGTTATCAGTGAACATCTTACAAATTTGTTAGAATGTTTTGAATTTTATTTTCCATCAAAAGAAGATCCACGCATAGGAAATTTGTGGATCCAAAATCCATTTCTTTCATCAAAAGATAACTTAAATTTAACTGTAACTCTACAGGATAAGTTGTTGAAGCTGGCTACCGACGAAGGATTGAAAATCAGTTTTGAAAATACAGCATCACTTCCTTCATTTTGGATAAAAGCTAAAAATGACTATCCTGAGCTTGCTGAGATTGCTTTAAAATTGCTGCTTCTTTTCCCCTCAACATACCTCTGTGAGACCGGATTCTCTACTTTAAGTGTTATTAAAACAAAACATAGAAACAGTTTAAATATACATTATCCCCTGAGGGTAGCATTGTCATCAATCCAACCTAGATTAGACAAATTAACAAGCAAGAAGCAAGCTCACTTATCACATTAA
Amino sequence
MEEMIPLDSAKESLGTQLQSMEDRMECESPEPHPLQDNGSFLWFSMMSQSMGGDNLSSLDTNEAEIEPENMREKFFRSLARLLENKSNNTKIFSKAKYCQLIKEVKEAKAKAKKESVDYRRLARFDVILVQGNEKLIEAVNGETDKIRYYLHSEDLFDILHNTHLSIGHGGRTRMEKELQAKYKNITKEVIMLYLTLCKPCQQKNSKLKKVLTSKSIKEVSSRCQVDLIDMQLNPDGEYRFILHYQDLCTKLTFLRSLKSKRPTEVAHALLDIFTIIGAPSVLQSDNGREFSSQVVSELSNIWPELKIVHGKSQTCQSQSSAEQTEDIRKRIFSWMQTNNSSHWTEFLWFIQMSQNQPYHRSMQQTPCESAFSSEAKLGLSHSQLTEELVASLHTENELDQADKELENTLRAQYEENIETGTDSSDIEENLSVTPKVAEKSPPESRLRFLSCVVCEKECTGVNSCISCDGNIHAICGVPSQHGTEGCGRQITCSLCYETSTMKRKHDEIQRSLPVKPSKMLKPSGTPFSPDKVGDWMAKQASLDFFVKKRHAFSEHSSSNKRNVNNRSYPEEGKTKRVHASFTRKYDPSYIEFGFVAVIDGEVLKPQCIICGDVLANEAMKPSKLKRHLYSKHKEISSQPKEFFERKSSELKSQPKQVFNVSHINISALRASYKVALPVAKSKTPYTIAETLVKDCIKEVCLEMLGESAAKKVAQVPLSNDTIARRIQELANDMEDQLIEQIKLAKYFSLQLDECRDIANMIILLVYVRFEHDDDIKEEFFFSASLPTNTTSSELYEAVKNYIVNKCGLEFKFCVGVCSDGAASMTGKHSEVVTQIKELAPECKTTHCFIHRESLAMKKISAELNSVLNDIVKIVNYIKSNSLNSRLFSLLCDNMEADHKQLLLHAEIRWLSRGKVLSRMFEIRNELLVFLQGKKPMWSQLFKDVNWTARLAYLSDIFSIFNDLNASMQGKNATYFSMADKVEGQKQKLEAWKNRISTDCYDMFHNLTTIINEVGNDLDIAHLRKVISEHLTNLLECFEFYFPSKEDPRIGNLWIQNPFLSSKDNLNLTVTLQDKLLKLATDEGLKISFENTASLPSFWIKAKNDYPELAEIALKLLLLFPSTYLCETGFSTLSVIKTKHRNSLNIHYPLRVALSSIQPRLDKLTSKKQAHLSH*