ENST00000673792.1 ARID5A
Information
- Transcript ID
- ENST00000673792.1
- Genome
- hg38
- Position
- chr2:96,536,752-96,552,396
- Strand
- +
- CDS length
- 984
- Amino acid length
- 328
- Gene symbol
- ARID5A
- Gene type
- protein-coding
- Gene description
- AT-rich interaction domain 5A
- Gene Entrez Gene ID
- 10865
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 96,536,752 | 96,536,830 |
| 2 | 96,547,402 | 96,547,517 |
| 3 | 96,549,321 | 96,549,459 |
| 4 | 96,549,753 | 96,549,805 |
| 5 | 96,550,188 | 96,550,285 |
| 6 | 96,550,574 | 96,550,733 |
| 7 | 96,551,099 | 96,551,326 |
| 8 | 96,552,211 | 96,552,396 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 96,536,827 | 96,536,830 |
| 2 | CDS | 96,547,402 | 96,547,517 |
| 3 | CDS | 96,549,321 | 96,549,459 |
| 4 | CDS | 96,549,753 | 96,549,805 |
| 5 | CDS | 96,550,188 | 96,550,285 |
| 6 | CDS | 96,550,574 | 96,550,733 |
| 7 | CDS | 96,551,099 | 96,551,326 |
| 8 | CDS | 96,552,211 | 96,552,396 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr2 | 97,202,489 | 97,218,133 | Link |
CDS sequence
ATGGCAGCCCCTGTCAAAGGGAACAGGAAGCAGTCCACGGAGGGTGACGCCCTAGACCCACCTGCATCCCCCAAACCTGCTGGCAAGCAGAACGGAATCCAGAACCCCATCTCGCTGGAGGACTCCCCCGAGGCAGGCGGGGAGCGGGAGGAGGAGCAGGAGCGGGAGGAGGAGCAGGCCTTCCTGGTCAGCCTCTACAAGTTCATGAAGGAGCGACACACGCCCATCGAGAGGGTGCCCCATCTCGGCTTCAAGCAGATTAACCTGTGGAAGATCTACAAAGCAGTGGAGAAGCTGGGGGCCTATGAGCTGGTGACCGGGCGCCGCCTCTGGAAGAACGTGTACGACGAGCTGGGGGGCAGCCCAGGCAGCACCAGCGCGGCCACGTGCACGCGCCGCCACTACGAGAGGCTGGTCCTGCCATACGTGCGGCACCTGAAGGGGGAGGATGACAAGCCGCTGCCCACCTCCAAGCCCAGGAAACAGTACAAGATGGCTAAGGAGAACAGGGGGGATGATGGGGCCACCGAGAGGCCGAAGAAGGCCAAGGAGGAGCGGCGCATGGACCAGATGATGCCAGGAAAGACCAAAGCAGATGCTGCTGACCCAGCACCACTTCCCAGCCAGGAGCCCCCCAGGAACAGCACAGAACAGCAGGGCCTGGCCTCTGGGTCTTCTGTGTCCTTTGTGGGTGCCAGCGGCTGTCCTGAGGCCTACAAGCGGCTCCTATCCAGCTTCTACTGCAAGGGGACACACGGCATCATGTCACCACTGGCCAAAAAGAAGCTCCTGGCCCAGTGCCCTCCGCCACAGACTTTGCCCGGCCTCATCTGCCTGGCACGCACCACCAGTCACAACCTATGCAGCGCCCCACTTCTTCCACCTCAACACCAAGCTGTAGGCCAGCCCATGGTGTTGTGTACACTGTGGAGTCGACAGGGGCCTACAACAGGCAGGTACTGCTGCCAGGGGGCTCTGAACTAG
Amino sequence
MAAPVKGNRKQSTEGDALDPPASPKPAGKQNGIQNPISLEDSPEAGGEREEEQEREEEQAFLVSLYKFMKERHTPIERVPHLGFKQINLWKIYKAVEKLGAYELVTGRRLWKNVYDELGGSPGSTSAATCTRRHYERLVLPYVRHLKGEDDKPLPTSKPRKQYKMAKENRGDDGATERPKKAKEERRMDQMMPGKTKADAADPAPLPSQEPPRNSTEQQGLASGSSVSFVGASGCPEAYKRLLSSFYCKGTHGIMSPLAKKKLLAQCPPPQTLPGLICLARTTSHNLCSAPLLPPQHQAVGQPMVLCTLWSRQGPTTGRYCCQGALN*