ENST00000639438.3 PAX4
Information
- Transcript ID
- ENST00000639438.3
- Genome
- hg19
- Position
- chr7:127,250,346-127,258,196
- Strand
- -
- CDS length
- 1,056
- Amino acid length
- 352
- Gene symbol
- PAX4
- Gene type
- protein-coding
- Gene description
- paired box 4
- Gene Entrez Gene ID
- 5078
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 12 | 127,250,346 | 127,251,260 |
| 11 | 127,251,589 | 127,251,730 |
| 10 | 127,251,999 | 127,252,054 |
| 9 | 127,253,076 | 127,253,145 |
| 8 | 127,253,504 | 127,253,586 |
| 7 | 127,253,810 | 127,253,935 |
| 6 | 127,254,536 | 127,254,611 |
| 5 | 127,254,934 | 127,255,149 |
| 4 | 127,255,455 | 127,255,585 |
| 3 | 127,255,970 | 127,256,081 |
| 2 | 127,257,329 | 127,257,454 |
| 1 | 127,258,016 | 127,258,196 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 12 | CDS | 127,251,118 | 127,251,260 |
| 11 | CDS | 127,251,589 | 127,251,730 |
| 10 | CDS | 127,251,999 | 127,252,054 |
| 9 | CDS | 127,253,076 | 127,253,145 |
| 8 | CDS | 127,253,504 | 127,253,586 |
| 7 | CDS | 127,253,810 | 127,253,935 |
| 6 | CDS | 127,254,536 | 127,254,611 |
| 5 | CDS | 127,254,934 | 127,255,149 |
| 4 | CDS | 127,255,455 | 127,255,585 |
| 3 | CDS | 127,255,970 | 127,255,982 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr7 | 127,610,292 | 127,618,142 | Link |
CDS sequence
ATGCATCAGGACGGGATCAGCAGCATGAACCAGCTTGGGGGGCTCTTTGTGAATGGCCGGCCCCTGCCTCTGGATACCCGGCAGCAGATTGTGCGGCTAGCAGTCAGTGGAATGCGGCCCTGTGACATCTCACGGATCCTTAAGGTATCTAATGGCTGTGTGAGCAAGATCCTAGGGCGTTACTACCGCACAGGTGTCTTGGAGCCAAAGGGCATTGGGGGAAGCAAGCCACGGCTGGCTACACCCCCTGTGGTGGCTCGAATTGCCCAGCTGAAGGGTGAGTGTCCAGCCCTCTTTGCCTGGGAAATCCAACGCCAGCTTTGTGCTGAAGGGCTTTGCACCCAGGACAAGACTCCCAGTGTCTCCTCCATCAACCGAGTCCTGCGGGCATTACAGGAGGACCAGGGACTACCGTGCACACGGCTCAGGTCACCAGCTGTTTTGGCTCCAGCTGTCCTCACTCCCCATAGTGGCTCTGAGACTCCCCGGGGTACCCACCCAGGGACCGGCCACCGGAATCGGACTATCTTCTCCCCAAGCCAAGCAGAGGCACTGGAGAAAGAGTTCCAGCGTGGGCAGTATCCTGATTCAGTGGCCCGTGGAAAGCTGGCTACTGCCACCTCTCTGCCTGAGGACACGGTGAGGGTCTGGTTTTCCAACAGAAGAGCCAAATGGCGTCGGCAAGAGAAGCTCAAGTGGGAAATGCAGCTGCCAGGTGCTTCCCAGGGGCTGACTGTACCAAGGGTTGCCCCAGGAATCATCTCTGCACAGCAGTCCCCTGGCAGTGTGCCCACAGCAGCCCTGCCTGCCCTGGAACCACTGGGTCCCTCCTGCTATCAGCTGTGCTGGGCAACAGCACCAGAAAGGTGTCTGAGTGACACCCCACCTAAAGCCTGTCTCAAGCCCTGCTGGGGCCACTTGCCCCCACAGCCGAATTCCCTGGACTCAGGACTGCTTTGCCTTCCTTGCCCTTCCTCCCACTGTCACCTGGCCAGTCTTAGTGGCTCTCAGGCCCTGCTCTGGCCTGGCTGCCCACTACTGTATGGCTTGGAATGA
Amino sequence
MHQDGISSMNQLGGLFVNGRPLPLDTRQQIVRLAVSGMRPCDISRILKVSNGCVSKILGRYYRTGVLEPKGIGGSKPRLATPPVVARIAQLKGECPALFAWEIQRQLCAEGLCTQDKTPSVSSINRVLRALQEDQGLPCTRLRSPAVLAPAVLTPHSGSETPRGTHPGTGHRNRTIFSPSQAEALEKEFQRGQYPDSVARGKLATATSLPEDTVRVWFSNRRAKWRRQEKLKWEMQLPGASQGLTVPRVAPGIISAQQSPGSVPTAALPALEPLGPSCYQLCWATAPERCLSDTPPKACLKPCWGHLPPQPNSLDSGLLCLPCPSSHCHLASLSGSQALLWPGCPLLYGLE*