ENST00000612714.1 LCN8

Information
Transcript ID
ENST00000612714.1
Genome
hg19
Position
chr9:139,648,840-139,652,995
Strand
-
CDS length
528
Amino acid length
176
Gene symbol
LCN8
Gene type
protein-coding
Gene description
lipocalin 8
Gene Entrez Gene ID
138307
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
7 139,648,840 139,648,961
6 139,649,587 139,649,612
5 139,649,696 139,649,785
4 139,649,864 139,649,968
3 139,650,974 139,651,044
2 139,651,490 139,651,620
1 139,652,903 139,652,995
CDS
Exon number Type Start Stop
7 CDS 139,648,950 139,648,961
6 CDS 139,649,587 139,649,612
5 CDS 139,649,696 139,649,785
4 CDS 139,649,864 139,649,968
3 CDS 139,650,974 139,651,044
2 CDS 139,651,490 139,651,620
1 CDS 139,652,903 139,652,995
Other genome
Genome Chromosome Start End Links
hg38 chr9 136,754,388 136,758,543 Link
CDS sequence
ATGCCTGGTGCAGCAGAGGCCCTCCCCACTGTCACTGTCACTCTGGTCGCTGGCGCTGTGCCTCCGGCCTCCGGAGCTCTGACTGCCCACTGCATTGGAGGATTCTGGAGGGAAGTCGGTGTGGCCTCCGATCAAAGCCTGGTGCTGACGGCCCCGAAGCGGGTGGAGGGCTTGTTCCTCACCTTGAGCGGGAGTAACCTGACCGTGAAGGTTGCATATAACAGCTCAGGAAGCTGTGAGATAGAGAAGATCGTGGGCTCAGAAATAGACAGTACGGGAAAATTCGCTTTTCCTGGCCACAGAGAGATCCACGTGCTGGACACCGACTACGAGGGCTACGCCATCCTGCGGGTGTCCCTGATGTGGCGGGGCAGGAACTTTCGCGTCCTCAAGTACTTTACTCGGAGCCTTGAGGACAAGGACCGGCTGGGGTTCTGGAAGTTTCGGGAGCTGACAGCAGACACTGGTCTCTACCTGGCGGCCCGGCCTGGGCGGTGTGCCGAGCTCCTGAAGGAGGAGCTGATTTAA
Amino sequence
MPGAAEALPTVTVTLVAGAVPPASGALTAHCIGGFWREVGVASDQSLVLTAPKRVEGLFLTLSGSNLTVKVAYNSSGSCEIEKIVGSEIDSTGKFAFPGHREIHVLDTDYEGYAILRVSLMWRGRNFRVLKYFTRSLEDKDRLGFWKFRELTADTGLYLAARPGRCAELLKEELI*