ENST00000370193.4 LBX1
Information
- Transcript ID
- ENST00000370193.4
- Genome
- hg19
- Position
- chr10:102,986,751-102,989,220
- Strand
- -
- CDS length
- 846
- Amino acid length
- 282
- Gene symbol
- LBX1
- Gene type
- protein-coding
- Gene description
- ladybird homeobox 1
- Gene Entrez Gene ID
- 10660
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 2 | 102,986,751 | 102,987,547 |
| 1 | 102,988,248 | 102,989,220 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 102,987,027 | 102,987,547 |
| 1 | CDS | 102,988,248 | 102,988,572 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr10 | 101,226,994 | 101,229,463 | Link |
CDS sequence
ATGACTTCCAAGGAGGACGGCAAGGCGGCGCCGGGGGAGGAGCGGCGGCGCAGCCCGCTGGACCACCTGCCTCCGCCTGCCAACTCCAACAAGCCACTGACGCCGTTCAGCATCGAGGACATCCTCAACAAGCCGTCTGTGCGGAGAAGTTACTCGCTGTGCGGGGCGGCGCACCTGCTGGCCGCCGCGGACAAGCACGCGCAGGGCGGCTTGCCCCTGGCGGGCCGCGCGCTGCTCTCGCAGACCTCGCCGCTGTGCGCGCTGGAGGAGCTCGCCAGCAAGACGTTTAAGGGGCTGGAGGTCAGCGTTCTGCAGGCAGCCGAAGGCCGCGACGGTATGACCATCTTTGGGCAGCGGCAGACCCCTAAGAAGCGGCGAAAGTCGCGCACGGCCTTCACCAACCACCAGATCTATGAATTGGAAAAGCGCTTTCTATACCAGAAGTACCTGTCCCCCGCCGATCGCGACCAAATCGCGCAGCAGCTGGGCCTCACCAACGCGCAAGTCATCACCTGGTTCCAGAATCGGCGCGCTAAGCTCAAGCGGGACCTGGAGGAGATGAAGGCCGACGTAGAGTCCGCCAAGAAACTGGGCCCCAGCGGGCAGATGGACATCGTGGCGCTGGCCGAACTCGAGCAGAACTCGGAGGCCACAGCCGGCGGTGGCGGCGGCTGCGGCAGGGCCAAGTCGAGGCCCGGCTCTCCGGTCCTCCCCCCAGGCGCCCCGAAGGCCCCGGGCGCTGGCGCCCTGCAGCTCTCGCCTGCCTCTCCGCTCACGGACCAGCCGGCCAGCAGCCAGGACTGCTCGGAGGACGAGGAAGACGAAGAGATCGACGTGGACGATTGA
Amino sequence
MTSKEDGKAAPGEERRRSPLDHLPPPANSNKPLTPFSIEDILNKPSVRRSYSLCGAAHLLAAADKHAQGGLPLAGRALLSQTSPLCALEELASKTFKGLEVSVLQAAEGRDGMTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADVESAKKLGPSGQMDIVALAELEQNSEATAGGGGGCGRAKSRPGSPVLPPGAPKAPGAGALQLSPASPLTDQPASSQDCSEDEEDEEIDVDD*