ENST00000538554.6 LTO1
Information
- Transcript ID
- ENST00000538554.6
- Genome
- hg19
- Position
- chr11:69,467,844-69,490,112
- Strand
- -
- CDS length
- 666
- Amino acid length
- 222
- Gene symbol
- LTO1
- Gene type
- protein-coding
- Gene description
- LTO1 maturation factor of ABCE1
- Gene Entrez Gene ID
- 220064
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 7 | 69,467,844 | 69,468,087 |
| 6 | 69,468,926 | 69,469,178 |
| 5 | 69,471,368 | 69,471,420 |
| 4 | 69,482,663 | 69,482,780 |
| 3 | 69,486,517 | 69,486,587 |
| 2 | 69,487,984 | 69,488,089 |
| 1 | 69,489,958 | 69,490,112 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 7 | CDS | 69,468,073 | 69,468,087 |
| 6 | CDS | 69,468,926 | 69,469,178 |
| 5 | CDS | 69,471,368 | 69,471,420 |
| 4 | CDS | 69,482,663 | 69,482,780 |
| 3 | CDS | 69,486,517 | 69,486,587 |
| 2 | CDS | 69,487,984 | 69,488,089 |
| 1 | CDS | 69,489,958 | 69,490,007 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr11 | 69,653,076 | 69,675,344 | Link |
CDS sequence
ATGGCTGGCAGTCAGGACATATTCGATGCCATCGTGATGGCGGATGAGAGGTTTCATGGGGAAGGGTATCGGGAAGGCTATGAAGAAGGCAGTAGTTTGGGTGTGATGGAGGGAAGGCAGCATGGCACGCTGCATGGAGCCAAAATCGGGTCTGAGATCGGGTGCTACCAAGGTTTTGCTTTTGCATGGAAATGTCTACTGCACAGTTGCACCACTGAGAAGGACAGCAGAAAGATGAAGGTCTTAGAATCATTGATTGGAATGATCCAGAAATTCCCTTATGATGACCCTACTTACGATAAACTCCATGAAGACTTAGACAAGATCAGAGGAAAATTTAAACAGACGGGCCTTTCGCCTTCCGCCGTGATGGTGAGGCCTCCCAGCTACGTAGAACTGCCGGTTACATGTTGGTGCTGGGAAGCGCCGCGGTGCAACCAGAAATGCACAGACCCAGCCGCCCGCCGCCCAGACCCTCAGACTTGCGCGTCACAGGACAGACTCCGCTGTGCCCCGTGCACTTGCCACCAGCCTTTGGCCTCTCGATACACACAACATCCAGGACTTGTGCCCTTGCCCCATCACGACAGACAAAGCGTCCCTCAAGGCCCCCGCGTGGTTCAGACAGACGCCGCAGCCAGGATGGTTGAGCAGCAAACAATGTGA
Amino sequence
MAGSQDIFDAIVMADERFHGEGYREGYEEGSSLGVMEGRQHGTLHGAKIGSEIGCYQGFAFAWKCLLHSCTTEKDSRKMKVLESLIGMIQKFPYDDPTYDKLHEDLDKIRGKFKQTGLSPSAVMVRPPSYVELPVTCWCWEAPRCNQKCTDPAARRPDPQTCASQDRLRCAPCTCHQPLASRYTQHPGLVPLPHHDRQSVPQGPRVVQTDAAARMVEQQTM*