ENST00000538027.6 CACNA2D4
Information
- Transcript ID
- ENST00000538027.6
- Genome
- hg19
- Position
- chr12:1,902,769-1,920,926
- Strand
- -
- CDS length
- 849
- Amino acid length
- 283
- Gene symbol
- CACNA2D4
- Gene type
- protein-coding
- Gene description
- calcium voltage-gated channel auxiliary subunit alpha2delta 4
- Gene Entrez Gene ID
- 93589
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 12 | 1,902,769 | 1,902,925 |
| 11 | 1,904,465 | 1,904,547 |
| 10 | 1,904,834 | 1,904,946 |
| 9 | 1,906,584 | 1,906,701 |
| 8 | 1,908,841 | 1,908,861 |
| 7 | 1,909,166 | 1,909,218 |
| 6 | 1,909,552 | 1,909,604 |
| 5 | 1,910,209 | 1,910,284 |
| 4 | 1,910,740 | 1,910,810 |
| 3 | 1,919,444 | 1,919,506 |
| 2 | 1,919,709 | 1,919,753 |
| 1 | 1,920,828 | 1,920,926 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 12 | CDS | 1,902,821 | 1,902,925 |
| 11 | CDS | 1,904,465 | 1,904,547 |
| 10 | CDS | 1,904,834 | 1,904,946 |
| 9 | CDS | 1,906,584 | 1,906,701 |
| 8 | CDS | 1,908,841 | 1,908,861 |
| 7 | CDS | 1,909,166 | 1,909,218 |
| 6 | CDS | 1,909,552 | 1,909,604 |
| 5 | CDS | 1,910,209 | 1,910,284 |
| 4 | CDS | 1,910,740 | 1,910,810 |
| 3 | CDS | 1,919,444 | 1,919,506 |
| 2 | CDS | 1,919,709 | 1,919,753 |
| 1 | CDS | 1,920,828 | 1,920,875 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr12 | 1,793,603 | 1,811,760 | Link |
CDS sequence
ATGAAGCTGGAATTCCTCCAGCGCAAATTCTGGGCGGCAACGCGGCAGTGCAGCACTGTGGATGGGCCGTGCACACAGAGCTGCGAGGACAGTGATCTGGACTGCTTCGTCATCGACAACAACGGGTTCATTCTGATCTCCAAGAGGTCCCGAGAGACGGGAAGATTTCTGGGGGAGGTGGATGGTGCTGTCCTGACCCAGCTGCTCAGCATGGGGGTGTTCAGCCAAGTGACTATGTATGACTATCAGGCCATGTGCAAACCCTCGAGTCACCACCACAGTGCAGCCCAGCCCCTGGTCAGCCCAATTTCTGCCTTCTTGACGGCGACCAGGTGGCTGCTGCAGGAGCTGGTGCTGTTCCTGCTGGAGTGGAGTGTCTGGGGCTCCTGGTACGACAGAGGGGCCGAGGCCAAAAGTGTCTTCCATCACTCCCACAAACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCAGCAGATTCCCAACAGTAACCTCCTCCTCCTGGTGACAGACCCCACCTGTGACTGCAGCATCTTCCCACCAGTGCTGCAGGAGGCGACAGAAGTCAAATATAATGCCTCTGTCAAATGTGACCGGATGCGCTCCCAGAAGCTCCGCCGGCGACCAGACTCCTGCCACGCCTTCCATCCAGAGGAGAATGCCCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCTCGCCGCCCCTACTCCTGCTGCCTGTGTGTGCCTGGGGGCTACTGCCCCAACTCCTGCGGTGA
Amino sequence
MKLEFLQRKFWAATRQCSTVDGPCTQSCEDSDLDCFVIDNNGFILISKRSRETGRFLGEVDGAVLTQLLSMGVFSQVTMYDYQAMCKPSSHHHSAAQPLVSPISAFLTATRWLLQELVLFLLEWSVWGSWYDRGAEAKSVFHHSHKHKKQDPLQPCDTEYPVFVYQPAIREANGIVECGPCQKVFVVQQIPNSNLLLLVTDPTCDCSIFPPVLQEATEVKYNASVKCDRMRSQKLRRRPDSCHAFHPEENAQDCGGASDTSASPPLLLLPVCAWGLLPQLLR*