ENST00000011898.10 TSPAN9
Information
- Transcript ID
- ENST00000011898.10
- Genome
- hg19
- Position
- chr12:3,186,545-3,395,725
- Strand
- +
- CDS length
- 720
- Amino acid length
- 240
- Gene symbol
- TSPAN9
- Gene type
- protein-coding
- Gene description
- tetraspanin 9
- Gene Entrez Gene ID
- 10867
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 3,186,545 | 3,186,619 |
| 2 | 3,192,819 | 3,192,885 |
| 3 | 3,310,343 | 3,310,422 |
| 4 | 3,387,587 | 3,387,778 |
| 5 | 3,388,158 | 3,388,232 |
| 6 | 3,389,548 | 3,389,649 |
| 7 | 3,390,364 | 3,390,495 |
| 8 | 3,390,900 | 3,390,983 |
| 9 | 3,392,211 | 3,395,725 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 3 | CDS | 3,310,360 | 3,310,422 |
| 4 | CDS | 3,387,587 | 3,387,778 |
| 5 | CDS | 3,388,158 | 3,388,232 |
| 6 | CDS | 3,389,548 | 3,389,649 |
| 7 | CDS | 3,390,364 | 3,390,495 |
| 8 | CDS | 3,390,900 | 3,390,983 |
| 9 | CDS | 3,392,211 | 3,392,282 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr12 | 3,077,379 | 3,286,559 | Link |
CDS sequence
ATGGCCAGGGGCTGCCTCTGCTGCTTGAAGTACATGATGTTCCTCTTCAATTTGATATTCTGGCTCTGTGGCTGTGGGCTGCTGGGAGTGGGCATCTGGCTCTCCGTGTCCCAAGGCAACTTTGCCACCTTCTCCCCCAGCTTCCCTTCGTTGTCTGCAGCCAACCTGGTCATTGCCATAGGCACCATTGTCATGGTGACGGGCTTCCTCGGCTGCCTGGGGGCCATCAAGGAAAACAAGTGCCTCCTCCTCAGCTTTTTCATCGTCCTGTTGGTCATCCTCCTAGCAGAGCTGATCTTACTCATCCTCTTCTTTGTCTACATGGACAAGGTGAACGAGAACGCCAAGAAGGACCTGAAGGAAGGCCTGCTGCTGTACCACACCGAGAACAACGTGGGGCTGAAGAACGCCTGGAACATCATCCAGGCTGAGATGCGATGCTGTGGTGTCACTGACTACACAGACTGGTACCCAGTGCTGGGGGAGAACACGGTTCCCGACCGCTGCTGCATGGAGAACTCCCAGGGCTGCGGGCGCAACGCCACCACGCCTTTGTGGAGAACGGGCTGCTATGAAAAGGTGAAGATGTGGTTCGATGACAATAAGCACGTGCTGGGCACGGTGGGGATGTGCATCCTCATCATGCAGATCCTGGGCATGGCCTTCTCCATGACCCTCTTCCAGCACATCCACCGGACTGGTAAGAAGTACGACGCATGA
Amino sequence
MARGCLCCLKYMMFLFNLIFWLCGCGLLGVGIWLSVSQGNFATFSPSFPSLSAANLVIAIGTIVMVTGFLGCLGAIKENKCLLLSFFIVLLVILLAELILLILFFVYMDKVNENAKKDLKEGLLLYHTENNVGLKNAWNIIQAEMRCCGVTDYTDWYPVLGENTVPDRCCMENSQGCGRNATTPLWRTGCYEKVKMWFDDNKHVLGTVGMCILIMQILGMAFSMTLFQHIHRTGKKYDA*