ENST00000443597.7 LRRC23
Information
- Transcript ID
- ENST00000443597.7
- Genome
- hg19
- Position
- chr12:7,013,986-7,023,393
- Strand
- +
- CDS length
- 1,032
- Amino acid length
- 344
- Gene symbol
- LRRC23
- Gene type
- protein-coding
- Gene description
- leucine rich repeat containing 23
- Gene Entrez Gene ID
- 10233
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
1 | 7,013,986 | 7,014,239 |
2 | 7,014,749 | 7,014,923 |
3 | 7,015,009 | 7,015,118 |
4 | 7,015,573 | 7,015,826 |
5 | 7,016,479 | 7,016,609 |
6 | 7,019,054 | 7,019,190 |
7 | 7,021,894 | 7,022,191 |
8 | 7,023,055 | 7,023,393 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
2 | CDS | 7,014,798 | 7,014,923 |
3 | CDS | 7,015,009 | 7,015,118 |
4 | CDS | 7,015,573 | 7,015,826 |
5 | CDS | 7,016,479 | 7,016,609 |
6 | CDS | 7,019,054 | 7,019,190 |
7 | CDS | 7,021,894 | 7,022,167 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg38 | chr12 | 6,904,822 | 6,914,229 | Link |
CDS sequence
ATGTCAGATGAAGATGATCTAGAAGACTCTGAGCCAGACCAGGATGATTCTGAGAAAGAAGAGGACGAGAAGGAGACAGAGGAGGGGGAGGACTACAGAAAAGAGGGGGAAGAGTTCCCTGAGGAATGGCTGCCCACCCCCCTCACGGAGGACATGATGAAGGAAGGGCTTTCTCTGCTCTGTAAGACAGGCAATGGGCTGGCTCATGCTTATGTCAAGCTGGAGGTTAAAGAGAGGGACCTGACAGACATCTACTTGCTGCGCTCCTACATCCATCTGCGCTATGTGGATATTTCTGAGAACCACCTGACAGACCTGTCTCCACTCAACTACCTCACCCACCTGCTCTGGCTCAAGGCTGATGGCAATCGGCTGCGAAGTGCCCAGATGAATGAACTGCCCTACCTGCAGATTGCTAGTTTTGCTTATAACCAGATTACTGACACTGAAGGCATCTCTCATCCTCGTCTTGAAACCCTGAATCTCAAAGGGAACAGCATCCACATGGTGACAGGTCTGGACCCCGAGAAGTTGATCAGCCTGCACACAGTGGAGCTTCGGGGGAACCAGCTGGAAAGCACCCTGGGAATCAATCTTCCTAAGCTGAAGAACCTCTACCTGGCCCAAAACATGCTGAAGAAGGTGGAAGGCTTGGAGGATCTGAGCAATCTCACCACCTTGCATCTTCGAGACAACCAGATTGACACCCTGAGTGGCTTCTCCAGAGAAATGAAATCATTGCAGTACCTCAACCTGAGGGGCAACATGGTGGCCAACCTGGGGGAGCTGGCCAAGCTTCGAGACCTGCCCAAGCTGCGAGCGTTGGTGCTGCTTGATAACCCATGCACGGACGAAACCAGCTACCGCCAGGAGGCCCTGGTGCAGATGCCATACCTTGAACGCCTGGACAAGGAATTCTATGAGGAGGAGGAACGGGCTGAGGCTGATGTGATTCGACAGAGGCTGAAGGAAGAAAAGGAGCAGGAGCCTGAGCCCCAGCGTGACCTGGAACCCGAACAGTCATTGATCTAG
Amino sequence
MSDEDDLEDSEPDQDDSEKEEDEKETEEGEDYRKEGEEFPEEWLPTPLTEDMMKEGLSLLCKTGNGLAHAYVKLEVKERDLTDIYLLRSYIHLRYVDISENHLTDLSPLNYLTHLLWLKADGNRLRSAQMNELPYLQIASFAYNQITDTEGISHPRLETLNLKGNSIHMVTGLDPEKLISLHTVELRGNQLESTLGINLPKLKNLYLAQNMLKKVEGLEDLSNLTTLHLRDNQIDTLSGFSREMKSLQYLNLRGNMVANLGELAKLRDLPKLRALVLLDNPCTDETSYRQEALVQMPYLERLDKEFYEEEERAEADVIRQRLKEEKEQEPEPQRDLEPEQSLI*