ENST00000599672.6 EMG1
Information
- Transcript ID
- ENST00000599672.6
- Genome
- hg19
- Position
- chr12:7,080,076-7,089,098
- Strand
- +
- CDS length
- 733
- Amino acid length
- 244.333
- Gene symbol
- EMG1
- Gene type
- protein-coding
- Gene description
- EMG1 N1-specific pseudouridine methyltransferase
- Gene Entrez Gene ID
- 10436
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 7,080,076 | 7,080,211 |
| 2 | 7,080,213 | 7,080,253 |
| 3 | 7,083,501 | 7,083,602 |
| 4 | 7,083,714 | 7,083,855 |
| 5 | 7,084,252 | 7,084,310 |
| 6 | 7,084,391 | 7,084,540 |
| 7 | 7,084,858 | 7,089,098 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 7,080,087 | 7,080,211 |
| 2 | CDS | 7,080,213 | 7,080,253 |
| 3 | CDS | 7,083,501 | 7,083,602 |
| 4 | CDS | 7,083,714 | 7,083,855 |
| 5 | CDS | 7,084,252 | 7,084,310 |
| 6 | CDS | 7,084,391 | 7,084,540 |
| 7 | CDS | 7,084,858 | 7,084,971 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr12 | 6,970,913 | 6,979,936 | Link |
CDS sequence
ATGGCCGCGCCCAGTGATGGATTCAAGCCTCGTGAACGAAGCGGTGGGGAGCAGGCACAGGACTGGGATGCTCTGCCACCCAAGCGGCCCCGACTAGGGGCAGGAAACAAGATCGGAGGCCGTAGTTATTGTGGTGCTGGAAGGGGCCAGTCTGGAGACAGTCAAGGTAGGGAAGACATATGAGCTACTCAACTGTGACAAGCACAAGTCTATATTGTTGAAGAATGGACGGGACCCTGGGGAAGCGCGGCCAGATATCACCCACCAGAGTTTGCTGATGCTGATGGATAGTCCCCTGAACCGAGCTGGCTTGCTACAGGTTTATATCCATACACAGAAGAATGTTCTGATTGAAGTGAATCCCCAGACCCGAATTCCCAGAACCTTTGACCGCTTTTGTGGCCTCATGGTTCAACTTTTACACAAGCTCAGTGTTCGAGCAGCTGATGGCCCCCAGAAGCTTTTGAAGGTAATTAAGAATCCAGTATCAGATCACTTTCCAGTTGGATGTATGAAAGTTGGCACTTCTTTTTCCATCCCGGTTGTCAGTGATGTGCGTGAGCTGGTGCCCAGCAGTGATCCTATTGTTTTTGTGGTAGGGGCCTTTGCCCATGGCAAGGTCAGTGTGGAGTATACAGAGAAGATGGTGTCCATCAGTAACTACCCCCTTTCTGCTGCCCTCACCTGTGCAAAACTTACCACAGCCTTTGAGGAAGTATGGGGGGTCATTTGA
Amino sequence
MAAPSDGFKPRERSGGEQAQDWDALPPKRPRLGAGNKIGGRSYCGAGRGQSGDSQGREDI*ATQL*QAQVYIVEEWTGPWGSAARYHPPEFADADG*SPEPSWLATGLYPYTEECSD*SESPDPNSQNL*PLLWPHGSTFTQAQCSSS*WPPEAFEGN*ESSIRSLSSWMYESWHFFFHPGCQ*CA*AGAQQ*SYCFCGRGLCPWQGQCGVYREDGVHQ*LPPFCCPHLCKTYHSL*GSMGGHL