ENST00000266546.11 CLSTN3

Information
Transcript ID
ENST00000266546.11
Genome
hg19
Position
chr12:7,282,967-7,311,541
Strand
+
CDS length
2,871
Amino acid length
957
Gene symbol
CLSTN3
Gene type
protein-coding
Gene description
calsyntenin 3
Gene Entrez Gene ID
9746
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 7,282,967 7,283,308
2 7,285,620 7,285,742
3 7,286,169 7,286,364
4 7,287,923 7,288,131
5 7,288,400 7,288,549
6 7,288,802 7,288,987
7 7,289,425 7,289,706
8 7,290,551 7,290,663
9 7,293,838 7,294,000
10 7,294,682 7,294,735
11 7,295,465 7,295,622
12 7,295,759 7,295,907
13 7,301,568 7,301,794
14 7,302,119 7,302,289
15 7,303,140 7,303,285
16 7,303,524 7,303,659
17 7,310,085 7,310,287
18 7,310,537 7,311,541
CDS
Exon number Type Start Stop
1 CDS 7,283,245 7,283,308
2 CDS 7,285,620 7,285,742
3 CDS 7,286,169 7,286,364
4 CDS 7,287,923 7,288,131
5 CDS 7,288,400 7,288,549
6 CDS 7,288,802 7,288,987
7 CDS 7,289,425 7,289,706
8 CDS 7,290,551 7,290,663
9 CDS 7,293,838 7,294,000
10 CDS 7,294,682 7,294,735
11 CDS 7,295,465 7,295,622
12 CDS 7,295,759 7,295,907
13 CDS 7,301,568 7,301,794
14 CDS 7,302,119 7,302,289
15 CDS 7,303,140 7,303,285
16 CDS 7,303,524 7,303,659
17 CDS 7,310,085 7,310,287
18 CDS 7,310,537 7,310,677
Other genome
Genome Chromosome Start End Links
hg38 chr12 7,130,371 7,158,945 Link
CDS sequence
ATGACCCTCCTGCTGCTGCCCCTTCTGCTGGCCTCTCTGCTCGCGTCCTGCTCCTGTAACAAAGCCAACAAGCACAAGCCATGGATTGAGGCAGAGTACCAGGGCATCGTCATGGAGAATGACAACACGGTCCTACTGAATCCACCACTCTTTGCCTTGGACAAGGATGCCCCGCTGCGCTATGCAGGTGAGATCTGCGGCTTCCGGCTCCATGGGTCTGGGGTGCCCTTTGAGGCTGTGATCCTTGACAAGGCGACAGGAGAGGGGCTGATCCGGGCCAAGGAGCCTGTGGACTGCGAGGCCCAGAAGGAACACACCTTCACCATCCAGGCCTATGACTGTGGCGAGGGCCCCGACGGGGCCAACACCAAGAAGTCCCACAAGGCCACTGTGCATGTGCGGGTCAACGATGTGAACGAGTTTGCCCCAGTGTTTGTGGAACGGCTGTATCGTGCGGCTGTGACAGAGGGGAAGCTGTACGATCGCATCCTGCGGGTGGAAGCCATTGACGGTGACTGCTCCCCCCAGTACAGCCAGATCTGCTACTATGAGATTCTCACACCCAACACCCCTTTCCTCATTGACAATGACGGGAACATTGAGAACACAGAGAAGCTGCAGTACAGTGGTGAGAGGCTCTATAAGTTTACAGTGACAGCTTATGACTGTGGGAAGAAGCGGGCAGCAGATGATGCTGAGGTGGAGATTCAGGTGAAGCCCACCTGTAAACCCAGCTGGCAAGGCTGGAACAAAAGGATCGAATATGCACCAGGTGCTGGGAGCTTGGCTTTGTTCCCTGGTATCCGCCTGGAGACCTGTGATGAACCACTCTGGAACATTCAGGCCACCATAGAGCTGCAGACCAGCCATGTGGCCAAGGGCTGTGACCGTGACAACTACTCAGAGCGGGCGCTGCGGAAACTCTGTGGTGCTGCCACTGGGGAGGTGGATCTGTTGCCCATGCCTGGCCCCAATGCCAACTGGACAGCAGGACTCTCGGTGCACTACAGCCAGGACAGCAGCCTGATCTACTGGTTCAATGGCACCCAGGCTGTGCAGGTGCCCCTGGGTGGCCCCAGTGGGCTGGGCTCTGGGCCCCAGGACAGCCTCAGTGACCACTTCACCCTGTCCTTCTGGATGAAGCATGGCGTAACTCCCAACAAGGGCAAGAAGGAAGAGGAAACCATCGTATGTAACACTGTCCAGAATGAGGACGGCTTCTCTCACTACTCGCTGACTGTCCACGGCTGTAGGATTGCCTTCCTCTACTGGCCCCTGCTTGAGAGTGCCCGCCCAGTCAAGTTCCTCTGGAAGCTGGAGCAGGTCTGTGATGATGAGTGGCACCACTACGCTCTGAACCTCGAGTTCCCCACAGTCACACTCTATACCGACGGCATCTCCTTCGACCCTGCCCTCATCCATGACAATGGCCTCATCCACCCACCCCGAAGGGAGCCTGCTCTCATGATTGGGGCCTGCTGGACTGAGGAGAAGAACAAAGAGAAGGAAAAGGGAGACAACAGTACAGACACCACCCAAGGAGACCCTTTGTCGATCCACCACTACTTCCATGGCTACCTGGCTGGTTTCAGCGTGCGCTCAGGTCGCCTGGAGAGCCGCGAGGTCATCGAGTGCCTCTATGCATGTCGGGAGGGGCTGGACTATAGGGATTTCGAGAGCCTGGGCAAAGGCATGAAGGTCCACGTGAACCCCTCACAGTCCCTGCTCACCCTGGAGGGGGATGATGTGGAGACCTTCAACCATGCCCTGCAGCATGTGGCTTACATGAACACTCTGCGCTTTGCCACGCCCGGCGTCAGGCCCCTGCGCCTCACCACTGCTGTCAAGTGCTTCAGCGAAGAGTCCTGCGTCTCCATCCCTGAAGTGGAGGGCTACGTGGTCGTCCTTCAGCCTGACGCCCCCCAGATCCTGCTGAGTGGCACTGCTCATTTTGCCCGCCCAGCTGTGGACTTTGAGGGAACCAACGGCGTCCCTTTGTTCCCTGATCTTCAAATCACCTGCTCCATTTCTCACCAGGTGGAGGCCAAAAAGGATGAGAGTTGGCAGGGCACAGTGACAGACACACGCATGTCGGATGAGATTGTGCACAACCTGGATGGCTGTGAAATTTCTCTGGTGGGGGATGACCTGGATCCCGAGCGGGAAAGCCTGCTCCTGGACACAACCTCTCTGCAGCAGCGGGGGCTGGAGCTCACCAACACATCTGCCTACCTCACTATTGCTGGGGTGGAGAGCATCACTGTGTATGAAGAGATCCTGAGGCAGGCTCGTTATCGGCTGCGACACGGAGCTGCCCTCTACACCAGGAAGTTCCGGCTTTCCTGCTCGGAAATGAATGGCCGTTACTCCAGCAATGAATTCATCGTGGAGGTCAATGTCCTGCACAGCATGAACCGGGTTGCCCACCCCAGCCACGTGCTCAGCTCCCAGCAGTTCCTGCACCGTGGTCACCAGCCCCCGCCTGAGATGGCTGGACACAGCCTAGCCAGCTCCCACAGAAACTCCATGATACCCAGCGCCGCAACCCTCATCATTGTGGTGTGCGTGGGCTTCCTGGTGCTCATGGTCGTCCTGGGCCTGGTGCGCATCCATTCCCTTCACCGCCGCGTCTCAGGGGCCGGCGGGCCTCCAGGGGCCTCCAGTGACCCCAAGGACCCAGACCTCTTCTGGGATGACTCAGCTCTCACCATCATTGTGAACCCCATGGAGTCCTACCAGAATCGGCAGTCCTGTGTGACGGGGGCTGTTGGGGGCCAGCAGGAGGATGAGGACAGCAGTGACTCGGAGGTGGCCGATTCCCCCAGCAGCGACGAGAGACGCATCATCGAGACCCCCCCACACCGCTACTAA
Amino sequence
MTLLLLPLLLASLLASCSCNKANKHKPWIEAEYQGIVMENDNTVLLNPPLFALDKDAPLRYAGEICGFRLHGSGVPFEAVILDKATGEGLIRAKEPVDCEAQKEHTFTIQAYDCGEGPDGANTKKSHKATVHVRVNDVNEFAPVFVERLYRAAVTEGKLYDRILRVEAIDGDCSPQYSQICYYEILTPNTPFLIDNDGNIENTEKLQYSGERLYKFTVTAYDCGKKRAADDAEVEIQVKPTCKPSWQGWNKRIEYAPGAGSLALFPGIRLETCDEPLWNIQATIELQTSHVAKGCDRDNYSERALRKLCGAATGEVDLLPMPGPNANWTAGLSVHYSQDSSLIYWFNGTQAVQVPLGGPSGLGSGPQDSLSDHFTLSFWMKHGVTPNKGKKEEETIVCNTVQNEDGFSHYSLTVHGCRIAFLYWPLLESARPVKFLWKLEQVCDDEWHHYALNLEFPTVTLYTDGISFDPALIHDNGLIHPPRREPALMIGACWTEEKNKEKEKGDNSTDTTQGDPLSIHHYFHGYLAGFSVRSGRLESREVIECLYACREGLDYRDFESLGKGMKVHVNPSQSLLTLEGDDVETFNHALQHVAYMNTLRFATPGVRPLRLTTAVKCFSEESCVSIPEVEGYVVVLQPDAPQILLSGTAHFARPAVDFEGTNGVPLFPDLQITCSISHQVEAKKDESWQGTVTDTRMSDEIVHNLDGCEISLVGDDLDPERESLLLDTTSLQQRGLELTNTSAYLTIAGVESITVYEEILRQARYRLRHGAALYTRKFRLSCSEMNGRYSSNEFIVEVNVLHSMNRVAHPSHVLSSQQFLHRGHQPPPEMAGHSLASSHRNSMIPSAATLIIVVCVGFLVLMVVLGLVRIHSLHRRVSGAGGPPGASSDPKDPDLFWDDSALTIIVNPMESYQNRQSCVTGAVGGQQEDEDSSDSEVADSPSSDERRIIETPPHRY*