ENST00000543824.5 PHC1

Information
Transcript ID
ENST00000543824.5
Genome
hg19
Position
chr12:9,067,149-9,093,000
Strand
+
CDS length
3,015
Amino acid length
1,005
Gene symbol
PHC1
Gene type
protein-coding
Gene description
polyhomeotic homolog 1
Gene Entrez Gene ID
1911
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 9,067,149 9,067,423
2 9,068,657 9,068,665
3 9,070,226 9,070,387
4 9,072,352 9,072,462
5 9,073,581 9,073,661
6 9,074,197 9,074,346
7 9,075,229 9,075,384
8 9,083,031 9,083,523
9 9,085,159 9,085,946
10 9,086,461 9,086,608
11 9,086,863 9,087,074
12 9,087,720 9,087,834
13 9,089,452 9,089,560
14 9,089,772 9,089,922
15 9,090,425 9,090,656
16 9,091,901 9,093,000
CDS
Exon number Type Start Stop
3 CDS 9,070,274 9,070,387
4 CDS 9,072,352 9,072,462
5 CDS 9,073,581 9,073,661
6 CDS 9,074,197 9,074,346
7 CDS 9,075,229 9,075,384
8 CDS 9,083,031 9,083,523
9 CDS 9,085,159 9,085,946
10 CDS 9,086,461 9,086,608
11 CDS 9,086,863 9,087,074
12 CDS 9,087,720 9,087,834
13 CDS 9,089,452 9,089,560
14 CDS 9,089,772 9,089,922
15 CDS 9,090,425 9,090,656
16 CDS 9,091,901 9,092,055
Other genome
Genome Chromosome Start End Links
hg38 chr12 8,914,553 8,940,404 Link
CDS sequence
ATGGAGACTGAGAGCGAGCAGAACTCCAATTCCACCAATGGGAGTTCTAGCTCAGGGGGCAGCTCTCGGCCCCAGATAGCTCAAATGTCACTTTATGAACGACAAGCAGTGCAGGCTCTGCAAGCACTGCAGCGGCAGCCCAATGCAGCTCAGTATTTCCACCAGTTCATGCTCCAGCAGCAGCTCAGTAATGCCCAGCTGCATAGCCTGGCTGCCGTCCAGCAGGCCACAATTGCTGCCAGTCGGCAGGCCAGCTCCCCAAACACCAGCACTACACAGCAGCAGACTACCACCACCCAGGCCTCGATCAATCTGGCCACCACATCGGCCGCCCAGCTCATCAGCCGATCCCAGAGTGTGAGCTCTCCCAGTGCTACCACCTTGACCCAATCTGTGCTACTGGGGAACACCACCTCCCCACCCCTCAACCAGTCTCAGGCCCAGATGTATCTACGGCCACAGCTGGGAAACCTATTGCAGGTAAACCGAACCCTGGGTCGGAATGTGCCTCTAGCCTCCCAACTCATCCTGATGCCTAATGGGGCGGTGGCTGCAGTCCAGCAGGAGGTGCCATCTGCTCAGTCTCCTGGAGTTCATGCAGATGCAGATCAGGTTCAGAACTTGGCAGTAAGGAATCAACAGGCCTCAGCTCAAGGACCTCAGATGCAAGGCTCCACTCAGAAGGCCATTCCTCCAGGAGCCTCCCCTGTCTCTAGCCTCTCCCAGGCCTCTAGCCAGGCCCTAGCGGTGGCACAGGCTTCCTCTGGGGCCACAAACCAGTCCCTCAACCTTAGTCAAGCTGGTGGAGGCAGTGGGAATAGCATCCCAGGGTCCATGGGTCCAGGTGGAGGTGGGCAGGCACATGGTGGTTTGGGTCAGTTGCCTTCCTCAGGAATGGGTGGTGGGAGCTGTCCCAGAAAGGGTACAGGAGTGGTGCAGCCCTTGCCTGCAGCCCAAACAGTGACTGTGAGCCAGGGCAGCCAGACAGAGGCAGAAAGTGCAGCAGCCAAGAAGGCAGAAGCAGATGGGAGTGGCCAGCAGAATGTGGGCATGAACCTGACACGGACAGCCACACCTGCGCCCAGCCAGACACTTATTAGCTCAGCCACCTACACACAGATCCAGCCCCATTCACTGATTCAGCAACAGCAACAGATCCACCTCCAGCAGAAACAGGTGGTGATCCAGCAGCAGATTGCCATCCACCACCAGCAGCAGTTCCAGCACCGGCAGTCCCAGCTCCTTCACACAGCTACACACCTCCAGTTGGCGCAGCAGCAGCAGCAGCAACAACAGCAACAGCAGCAACAGCAGCAGCCGCAAGCCACCACCCTCACTGCCCCTCAGCCACCACAGGTCCCACCTACTCAGCAGGTCCCACCTTCCCAGTCCCAGCAGCAAGCCCAAACCCTGGTCGTTCAGCCCATGCTTCAGTCTTCACCCTTGTCTCTTCCACCTGATGCAGCCCCTAAGCCACCAATTCCCATCCAATCCAAACCACCTGTAGCACCTATCAAGCCGCCTCAGTTAGGGGCCGCTAAGATGTCAGCTGCCCAGCAACCACCACCCCATATCCCTGTGCAAGTTGTAGGCACTCGACAGCCAGGTACAGCCCAGGCACAGGCTTTGGGGTTGGCACAGCTGGCAGCTGCTGTACCTACTTCCCGGGGGATGCCAGGTACAGTGCAGTCTGGTCAGGCCCATTTGGCCTCCTCGCCACCTTCATCCCAGGCTCCTGGTGCACTGCAGGAGTGCCCTCCCACATTGGCCCCTGGGATGACCCTTGCTCCTGTGCAGGGGACAGCACATGTGGTAAAGGGTGGGGCTACCACCTCCTCACCTGTTGTAGCCCAGGTCCCTGCTGCCTTCTATATGCAGTCTGTGCACTTGCCGGGTAAACCCCAGACATTGGCTGTCAAACGCAAGGCTGACTCTGAGGAGGAGAGAGATGATGTCTCCACATTGGGTTCAATGCTTCCTGCCAAGGCATCTCCAGTAGCAGAAAGCCCAAAAGTCATGGACGAGAAGAGCAGTCTTGGAGAAAAAGCTGAATCAGTGGCTAATGTGAATGCTAATACTCCAAGCAGTGAACTAGTAGCCTTGACCCCCGCCCCTTCAGTACCGCCTCCTACACTAGCCATGGTGTCTAGACAAATGGGTGACTCAAAACCCCCACAGGCCATCGTGAAGCCCCAGATTCTCACCCACATCATTGAAGGCTTTGTTATCCAGGAAGGAGCAGAACCTTTCCCGGTGGGTTGTTCTCAGTTACTGAAGGAGTCTGAGAAGCCACTACAGACTGGCCTTCCGACAGGGCTGACTGAGAATCAGTCAGGTGGCCCTTTGGGAGTGGACAGCCCATCTGCTGAGTTAGATAAGAAGGCGAATCTCCTGAAGTGCGAGTACTGTGGGAAGTACGCCCCCGCAGAGCAGTTTCGTGGCTCTAAGAGGTTCTGCTCCATGACTTGCGCTAAGAGGTACAATGTGAGCTGTAGCCATCAGTTCCGGCTGAAGAGGAAAAAAATGAAAGAGTTTCAAGAAGCCAACTATGCTCGCGTTCGCAGGCGTGGACCCCGCCGCAGCTCCTCTGACATTGCCCGTGCCAAGATTCAGGGCAAGTGCCACCGGGGTCAAGAAGACTCTAGCCGGGGTTCAGATAATTCCAGTTATGATGAAGCACTCTCTCCAACATCTCCTGGGCCTTTATCAGTAAGAGCTGGGCATGGAGAACGTGACCTGGGGAATCCCAATACAGCTCCACCTACACCGGAATTACATGGCATCAACCCTGTGTTCCTGTCCAGTAATCCCAGCCGTTGGAGTGTAGAGGAGGTGTACGAGTTTATTGCTTCTCTCCAAGGCTGCCAAGAGATTGCAGAGGAATTTCGCTCACAGGAGATTGATGGACAGGCCCTTTTATTACTTAAAGAAGAACATCTTATGAGTGCCATGAACATCAAGCTGGGCCCTGCCCTCAAGATCTGCGCCAAGATAAATGTCCTCAAGGAGACCTAA
Amino sequence
METESEQNSNSTNGSSSSGGSSRPQIAQMSLYERQAVQALQALQRQPNAAQYFHQFMLQQQLSNAQLHSLAAVQQATIAASRQASSPNTSTTQQQTTTTQASINLATTSAAQLISRSQSVSSPSATTLTQSVLLGNTTSPPLNQSQAQMYLRPQLGNLLQVNRTLGRNVPLASQLILMPNGAVAAVQQEVPSAQSPGVHADADQVQNLAVRNQQASAQGPQMQGSTQKAIPPGASPVSSLSQASSQALAVAQASSGATNQSLNLSQAGGGSGNSIPGSMGPGGGGQAHGGLGQLPSSGMGGGSCPRKGTGVVQPLPAAQTVTVSQGSQTEAESAAAKKAEADGSGQQNVGMNLTRTATPAPSQTLISSATYTQIQPHSLIQQQQQIHLQQKQVVIQQQIAIHHQQQFQHRQSQLLHTATHLQLAQQQQQQQQQQQQQQQPQATTLTAPQPPQVPPTQQVPPSQSQQQAQTLVVQPMLQSSPLSLPPDAAPKPPIPIQSKPPVAPIKPPQLGAAKMSAAQQPPPHIPVQVVGTRQPGTAQAQALGLAQLAAAVPTSRGMPGTVQSGQAHLASSPPSSQAPGALQECPPTLAPGMTLAPVQGTAHVVKGGATTSSPVVAQVPAAFYMQSVHLPGKPQTLAVKRKADSEEERDDVSTLGSMLPAKASPVAESPKVMDEKSSLGEKAESVANVNANTPSSELVALTPAPSVPPPTLAMVSRQMGDSKPPQAIVKPQILTHIIEGFVIQEGAEPFPVGCSQLLKESEKPLQTGLPTGLTENQSGGPLGVDSPSAELDKKANLLKCEYCGKYAPAEQFRGSKRFCSMTCAKRYNVSCSHQFRLKRKKMKEFQEANYARVRRRGPRRSSSDIARAKIQGKCHRGQEDSSRGSDNSSYDEALSPTSPGPLSVRAGHGERDLGNPNTAPPTPELHGINPVFLSSNPSRWSVEEVYEFIASLQGCQEIAEEFRSQEIDGQALLLLKEEHLMSAMNIKLGPALKICAKINVLKET*