ENST00000542728.5 BORCS5

Information
Transcript ID
ENST00000542728.5
Genome
hg19
Position
chr12:12,510,013-12,618,717
Strand
+
CDS length
534
Amino acid length
178
Gene symbol
BORCS5
Gene type
protein-coding
Gene description
BLOC-1 related complex subunit 5
Gene Entrez Gene ID
118426
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 12,510,013 12,510,052
2 12,514,140 12,514,283
3 12,588,562 12,588,719
4 12,618,480 12,618,717
CDS
Exon number Type Start Stop
1 CDS 12,510,052 12,510,052
2 CDS 12,514,140 12,514,283
3 CDS 12,588,562 12,588,719
4 CDS 12,618,480 12,618,710
Other genome
Genome Chromosome Start End Links
hg38 chr12 12,357,079 12,465,783 Link
CDS sequence
ATGACTCCTTCACCAGCCAAGCATAGAGCCAAGATGGATGATATTGTGGTTGTAGCTCAGGGCTCCCAGGCCTCACGGAACGTCAGCAACGATCCCGATGTCATCAAGTTGCAAGAGATTCCAACCTTCCAGCCCCTTTTGAAAGGGCTATTGAGTGGCCAGACTTCCCCAACAAATGCCAAATTGGAGAAACTGGACTCTCAGCAGGTGTTGCAGCTCTGCCTCCGATATCAAGATCACCTGCATCAGTGTGCAGAGGCCGTTGCTTTTGACCAGAATGCTTTGGTTAAACGAATCAAAGAGATGGATCTGTCTGTAGAAACTCTGTTCAGCTTCATGCAGGAGCGCCAGAAAAGATACGCCAAGTATGCCGAGCAGATCCAGAAAGTGAACGAGATGTCCGCCATCCTCCGCCGCATACAGATGGGCATCGACCAGACTGTGCCCCTGCTGGACAGGCTCAACAGCATGCTGCCCGAGGGCGAGCGGCTGGAGCCCTTCAGCATGAAGCCCGACCGCGAGCTCAGGCTGTAG
Amino sequence
MTPSPAKHRAKMDDIVVVAQGSQASRNVSNDPDVIKLQEIPTFQPLLKGLLSGQTSPTNAKLEKLDSQQVLQLCLRYQDHLHQCAEAVAFDQNALVKRIKEMDLSVETLFSFMQERQKRYAKYAEQIQKVNEMSAILRRIQMGIDQTVPLLDRLNSMLPEGERLEPFSMKPDRELRL*