ENST00000539744.5 LMNTD1

Information
Transcript ID
ENST00000539744.5
Genome
hg19
Position
chr12:25,629,044-25,706,186
Strand
-
CDS length
876
Amino acid length
292
Gene symbol
LMNTD1
Gene type
protein-coding
Gene description
lamin tail domain containing 1
Gene Entrez Gene ID
160492
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
10 25,629,044 25,629,394
9 25,656,672 25,656,734
8 25,671,729 25,671,901
7 25,672,792 25,673,009
6 25,679,033 25,679,152
5 25,679,703 25,679,889
4 25,699,308 25,699,488
3 25,700,159 25,700,285
2 25,702,260 25,702,480
1 25,706,099 25,706,186
CDS
Exon number Type Start Stop
9 CDS 25,656,694 25,656,734
8 CDS 25,671,729 25,671,901
7 CDS 25,672,792 25,673,009
6 CDS 25,679,033 25,679,152
5 CDS 25,679,703 25,679,889
4 CDS 25,699,308 25,699,444
Other genome
Genome Chromosome Start End Links
hg38 chr12 25,476,110 25,553,252 Link
CDS sequence
ATGATTGGGGATGGAGAAGATTATTTCCTTTCTTTGTTTGGTGATTCAAAGAAACTTACAGCACACTCAAACTACACTCAGAAAACTTTAAAATACTTTTCTATGATTCTTGAAGAAGTTGGCCAATTTACCTCCAGTTCTCTTGGAGATGTTGAAATAGCTGAAGTGAATGTCAAGGGTTTGTTCGTGAAGCTCATTAACTCTTCCCTTGACAAAGAAATGGCAATTGGAGATCATATTCTCCAGCAAAATGTGAATGGACAAACCATTTCTTTGTACCGATTCCTTCCAAACATCGTAATGCAGGCAAATTCCACAGTAACAGTGTGGGCAGCAGCATCTGAAGCAAAGCATCAACCTCCATCAGATTTTCTTTGGAAGGAACAAGACAAGTTTAGAGCAAGTCCTGATTGTATAACAATCCTGTGCAAACCGAACGGTCAAGCCATTGCGTGGTACACCCCTATCCACTGGAAGCAAGCGTGGGAAAAATTAGATGCTGACGTTGAATTTAACAGATGTTCAGTAGTATCTCCAACATTCCGAAAGCGTGTGTTTCAGTGGACAGCATCTACAGCTACAATAACTAAAGAAAAACAAGATCAACCTAAGAAAGATATCTCAAATTATCAGGTGGAACAAGCTCAAGTTCTTCTTAAGAGAGAGAAGGAAATCCCACCAACCGTTTTCCCTAATCGCAGCCCTTGGTGCCAGAATCCCTATGTCTCTGCACATCCTTACTGTCCTCTGATTGAACCACACAATACATCCACCGCTGGAGGCAGATTGGATAGACAGCCCAGGACTCGGTCAACCAGACCTAATCGAGCCTCAGGGTCTAAGAAAAAGAAGACATCTGAGTCACAAAAGCAATAA
Amino sequence
MIGDGEDYFLSLFGDSKKLTAHSNYTQKTLKYFSMILEEVGQFTSSSLGDVEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYRFLPNIVMQANSTVTVWAAASEAKHQPPSDFLWKEQDKFRASPDCITILCKPNGQAIAWYTPIHWKQAWEKLDADVEFNRCSVVSPTFRKRVFQWTASTATITKEKQDQPKKDISNYQVEQAQVLLKREKEIPPTVFPNRSPWCQNPYVSAHPYCPLIEPHNTSTAGGRLDRQPRTRSTRPNRASGSKKKKTSESQKQ*