ENST00000552618.5 TMTC1

Information
Transcript ID
ENST00000552618.5
Genome
hg19
Position
chr12:29,658,632-29,936,731
Strand
-
CDS length
2,721
Amino acid length
907
Gene symbol
TMTC1
Gene type
protein-coding
Gene description
transmembrane O-mannosyltransferase targeting cadherins 1
Gene Entrez Gene ID
83857
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
19 29,658,632 29,659,919
18 29,664,976 29,665,053
17 29,667,415 29,667,537
16 29,669,282 29,669,419
15 29,670,360 29,670,504
14 29,671,405 29,671,540
13 29,673,551 29,673,653
12 29,689,142 29,689,250
11 29,709,790 29,709,933
10 29,736,340 29,736,507
9 29,757,111 29,757,232
8 29,786,080 29,786,269
7 29,812,813 29,812,916
6 29,813,737 29,813,818
5 29,904,599 29,904,805
4 29,908,642 29,908,818
3 29,911,637 29,911,710
2 29,920,831 29,921,008
1 29,936,383 29,936,731
CDS
Exon number Type Start Stop
19 CDS 29,659,779 29,659,919
18 CDS 29,664,976 29,665,053
17 CDS 29,667,415 29,667,537
16 CDS 29,669,282 29,669,419
15 CDS 29,670,360 29,670,504
14 CDS 29,671,405 29,671,540
13 CDS 29,673,551 29,673,653
12 CDS 29,689,142 29,689,250
11 CDS 29,709,790 29,709,933
10 CDS 29,736,340 29,736,507
9 CDS 29,757,111 29,757,232
8 CDS 29,786,080 29,786,269
7 CDS 29,812,813 29,812,916
6 CDS 29,813,737 29,813,818
5 CDS 29,904,599 29,904,805
4 CDS 29,908,642 29,908,818
3 CDS 29,911,637 29,911,710
2 CDS 29,920,831 29,921,008
1 CDS 29,936,383 29,936,684
Other genome
Genome Chromosome Start End Links
hg38 chr12 29,505,699 29,783,798 Link
CDS sequence
ATGGTGGTGACCACCTCTGCCCGAGGCGGCGGCGGGGACCGCACACCCTCCCGGCGGCGGGGCTGCGGGCTAGCGCCGGCCGGGGCCGCGGCGCTGCTGGCCGGGGCAAGCTGCCTGTGCTACGGCCGCTCCCTGCAGGGCGAGTTCGTGCACGACGACGTGTGGGCGATCGTGAACAACCCCGACGTGCGGCCCGGCGCCCCGCTCCGCTGGGGCATCTTCACCAACGACTTCTGGGGCAAGGGCATGGCCGAGAACACCAGCCACAAGTCCTACCGGCCGCTCTGCGTCCTCACCTTCAAGCTAAACATATTTTTGACTGGTATGAACCCATTCTACTTTCATGCAGTAAATATAATTTTACACTGCTTAGTGACTCTTGTGCTGATGTACACCTGTGATAAAACTGTCTTCAAGAATCGTGGACTTGCTTTTGTAACGGCATTGCTTTTTGCTGTACATCCTATTCATACTGAGGCGGTGGCTGGGATCGTTGGCAGAGCGGACGTGTTAGCGTGTCTGCTGTTTCTATTGGCCTTTCTCTCGTACAACAGGAGTCTGGATCAGGGCTGTGTTGGGGGAAGTTTCCCTTCCACGGTGTCTCCCTTCTTCTTGCTGCTCAGTTTGTTTCTGGGGACCTGTGCGATGCTGGTGAAAGAGACAGGCATCACGGTGTTTGGAGTGTGCTTGGTTTATGACCTCTTTTCCCTTTCCAACAAGCAAGACAAGTCGAGCAATGGGGCCCTCTGTCCACGCAGCCCACAGCAGCCCGGGAGCCCCCAGCCCTCCTCACTGCCAGGCCATCCTCACCGGGAGAATGGGAAGCAGCAGCGGTTCCCTCACAAAGGAGCTTGGGGTGGCTGCCACTCTCCACTGCCACCAGAACCCAAGAGCAGTGGATTCCCAGTGTCCCCACGAGCTGTGTGGTCCATGATGAGGTATCTGAGAGCAAGCAGCAATAGAAATTTCCTGCTTACCATGAGACCATTTTTAAAAAGGGCCATTTTGGTCCTAAGTTATGTGCTTGTCATTTTGTACTTCCGTCTGTGGATAATGGGAGGATCTATGCCCCTCTTTTCAGAGCAGGATAATCCAGCTTCATTTTCGCCTTACATTCTTACGAGATTCCTCACCTATTCCTACCTCTTGGCCTTCAATGTGTGGCTTCTGCTTGCACCCGTGACCCTGTGCTATGACTGGCAGGTCGGCAGTATTCCTCTGGTAGAGACCATATGGGACATGCGGAACTTAGCCACCATCTTTCTGGCGGTTGTGATGGCCTTATTGAGCCTGCACTGCTTAGCAGCCTTTAAGAGACTGGAGCACAAGGAGGTTTTAGTCGGCTTGTTGTTCCTGGTGTTCCCGTTCATTCCAGCCAGCAACCTCTTCTTCAGGGTGGGTTTTGTGGTGGCGGAGAGAGTCCTTTACATGCCTAGCATGGGCTACTGCATCCTTTTTGTGCATGGACTGAGCAAGCTCTGCACTTGGCTGAATCGATGTGGGGCCACCACCCTGATTGTGTCCACTGTGTTGCTGCTGTTGCTTTTCTCTTGGAAAACTGTGAAACAGAATGAAATTTGGCTGTCAAGAGAGTCCCTATTCAGGTTGTATCCACGCCATGCAAGTGCGCTCAACAACCTTGGAACACTGACGAGAGACACAGCAGAGGCAAAGATGTACTATCAGAGGGCTCTCCAGCTCCATCCACAGCATAACCGGGCTCTTTTCAATCTGGGGAATCTCCTCAAGTCCCAGGAGAAAAAGGAAGAAGCTATCACCTTACTGAAGGATTCCATCAAATATGGTCCAGAGTTTGCAGATGCATATTCAAGCTTAGCTTCGTTATTGGCTGAGCAGGAGCGGTTTAAAGAAGCTGAAGAAATATACCAAACTGGAATAAAGAACTGTCCAGACAGCTCAGATTTACACAACAACTATGGGGTTTTCTTAGTTGATACTGGCTTACCAGAAAAGGCAGTGGCCCATTACCAGCAGGCCATCAAACTTAGCCCCAGTCATCACGTGGCCATGGTGAACTTGGGAAGACTCTACAGGTCACTGGGAGAGAACAGCATGGCTGAAGAATGGTACAAGCGCGCCCTGCAGGTGGCACACAAAGCTGAGATATTGTCACCTTTGGGAGCACTGTATTACAACACTGGCCGATACGAAGAGGCTTTGCAGATTTACCAGGAAGCTGCAGCACTTCAGCCTTCTCAGAGGGAGCTCCGCTTGGCACTGGCTCAGGTTTTGGCCGTGATGGGTCAGACAAAAGAAGCTGAAAAGATGACCAATCACATTGTGTCAGAGGAGACCGGATGCCTTGAATGCTATCGCCTCTTGTCAGCCATCTATAGCAAGCAGGAGAACCACGACAAGGCACTTGATGCTATAGACAAGGCTCTCCAGCTGAAACCAAAGGACCCAAAAGTCATTTCTGAACTTTTTTTCACAAAAGGAAACCAATTAAGAGAGCAGAACCTTCTCGACAAAGCTTTTGAGAGCTATAGAGTGGCTGTGCAACTAAACCCAGACCAAGCACAGGCCTGGATGAACATGGGTGGCATCCAACACATCAAGGGAAAATATGTGTCTGCAAGAGCTTATTATGAGAGAGCCTTACAGCTGGTTCCAGACAGCAAACTGCTGAAGGAAAATCTTGCCAAATTGGATCGCCTAGAAAAACGATTACAAGAAGTTCGAGAAAAGGATCAAACATAG
Amino sequence
MVVTTSARGGGGDRTPSRRRGCGLAPAGAAALLAGASCLCYGRSLQGEFVHDDVWAIVNNPDVRPGAPLRWGIFTNDFWGKGMAENTSHKSYRPLCVLTFKLNIFLTGMNPFYFHAVNIILHCLVTLVLMYTCDKTVFKNRGLAFVTALLFAVHPIHTEAVAGIVGRADVLACLLFLLAFLSYNRSLDQGCVGGSFPSTVSPFFLLLSLFLGTCAMLVKETGITVFGVCLVYDLFSLSNKQDKSSNGALCPRSPQQPGSPQPSSLPGHPHRENGKQQRFPHKGAWGGCHSPLPPEPKSSGFPVSPRAVWSMMRYLRASSNRNFLLTMRPFLKRAILVLSYVLVILYFRLWIMGGSMPLFSEQDNPASFSPYILTRFLTYSYLLAFNVWLLLAPVTLCYDWQVGSIPLVETIWDMRNLATIFLAVVMALLSLHCLAAFKRLEHKEVLVGLLFLVFPFIPASNLFFRVGFVVAERVLYMPSMGYCILFVHGLSKLCTWLNRCGATTLIVSTVLLLLLFSWKTVKQNEIWLSRESLFRLYPRHASALNNLGTLTRDTAEAKMYYQRALQLHPQHNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQTGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGENSMAEEWYKRALQVAHKAEILSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVISELFFTKGNQLREQNLLDKAFESYRVAVQLNPDQAQAWMNMGGIQHIKGKYVSARAYYERALQLVPDSKLLKENLAKLDRLEKRLQEVREKDQT*