ENST00000546076.6 TSPAN11

Information
Transcript ID
ENST00000546076.6
Genome
hg19
Position
chr12:31,079,682-31,149,534
Strand
+
CDS length
762
Amino acid length
254
Gene symbol
TSPAN11
Gene type
protein-coding
Gene description
tetraspanin 11
Gene Entrez Gene ID
441631
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 31,079,682 31,079,730
2 31,106,915 31,107,009
3 31,116,761 31,116,952
4 31,131,496 31,131,570
5 31,132,501 31,132,605
6 31,135,467 31,135,625
7 31,135,999 31,136,085
8 31,144,791 31,149,534
CDS
Exon number Type Start Stop
2 CDS 31,106,926 31,107,009
3 CDS 31,116,761 31,116,952
4 CDS 31,131,496 31,131,570
5 CDS 31,132,501 31,132,605
6 CDS 31,135,467 31,135,625
7 CDS 31,135,999 31,136,085
8 CDS 31,144,791 31,144,850
Other genome
Genome Chromosome Start End Links
hg38 chr12 30,926,748 30,996,599 Link
CDS sequence
ATGGCCCACTATAAGACTGAGCAGGACGACTGGCTGATCATCTACTTGAAGTATTTACTCTTTGTCTTCAACTTCTTCTTCTGGGTCGGGGGAGCAGCCGTCCTGGCTGTGGGCATCTGGACCCTGGTGGAGAAGAGTGGCTACCTCAGCGTCCTGGCCTCCAGCACCTTTGCCGCCTCCGCCTACATCCTCATCTTTGCGGGCGTACTTGTCATGGTGACCGGCTTCCTGGGCTTCGGTGCCATCCTCTGGGAGCGGAAGGGCTGCCTCTCCACGTATTTCTGCCTGTTGCTCGTCATCTTCCTGGTTGAGCTGGTGGCGGGAGTCCTGGCCCATGTGTATTACCAGAGGCTGAGTGATGAACTGAAGCAGCACTTGAACCGGACTCTGGCTGAGAACTACGGGCAGCCCGGAGCCACGCAGATCACCGCCTCAGTGGACCGACTCCAGCAGGATTTCAAGTGCTGTGGAAGCAACAGCTCAGCCGACTGGCAGCACAGCACGTACATCCTGTTGCGGGAGGCCGAGGGCCGCCAGGTGCCCGACAGCTGCTGCAAGACAGTGGTGGTGCGCTGCGGCCAGCGGGCCCACCCCTCCAACATCTATAAGGTGGAGGGAGGCTGCCTCACCAAGCTGGAGCAGTTCCTGGCCGACCACCTGCTGCTTATGGGGGCAGTGGGCATCGGGGTGGCCTGCCTGCAGATCTGCGGGATGGTTCTCACCTGCTGCTTGCACCAGAGGCTCCAGCGGCATTTTTACTAA
Amino sequence
MAHYKTEQDDWLIIYLKYLLFVFNFFFWVGGAAVLAVGIWTLVEKSGYLSVLASSTFAASAYILIFAGVLVMVTGFLGFGAILWERKGCLSTYFCLLLVIFLVELVAGVLAHVYYQRLSDELKQHLNRTLAENYGQPGATQITASVDRLQQDFKCCGSNSSADWQHSTYILLREAEGRQVPDSCCKTVVVRCGQRAHPSNIYKVEGGCLTKLEQFLADHLLLMGAVGIGVACLQICGMVLTCCLHQRLQRHFY*