ENST00000538596.6 CPNE8
Information
- Transcript ID
- ENST00000538596.6
- Genome
- hg19
- Position
- chr12:39,046,160-39,115,024
- Strand
- -
- CDS length
- 702
- Amino acid length
- 234
- Gene symbol
- CPNE8
- Gene type
- protein-coding
- Gene description
- copine 8
- Gene Entrez Gene ID
- 144402
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 8 | 39,046,160 | 39,047,872 |
| 7 | 39,064,531 | 39,064,604 |
| 6 | 39,069,519 | 39,069,576 |
| 5 | 39,071,254 | 39,071,356 |
| 4 | 39,079,292 | 39,079,419 |
| 3 | 39,087,459 | 39,087,640 |
| 2 | 39,096,677 | 39,096,723 |
| 1 | 39,114,455 | 39,115,024 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 8 | CDS | 39,047,684 | 39,047,872 |
| 7 | CDS | 39,064,531 | 39,064,604 |
| 6 | CDS | 39,069,519 | 39,069,576 |
| 5 | CDS | 39,071,254 | 39,071,356 |
| 4 | CDS | 39,079,292 | 39,079,419 |
| 3 | CDS | 39,087,459 | 39,087,608 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr12 | 38,652,358 | 38,721,222 | Link |
CDS sequence
ATGAATCCTTACCAACTGAATGCCTATGGTATGGCACTAAAAGCAGTGGGAGAAATTGTTCAAGATTATGACAGTGATAAAATGTTTCCAGCTCTAGGATTTGGTGCAAAACTGCCTCCAGATGGAAGGATATCTCACGAATTTGCTTTGAATGGGAATCCTCAAAACCCCTACTGTGATGGCATTGAGGGGGTCATGGAGGCTTATTACAGGAGTCTGAAATCTGTACAACTATATGGGCCCACCAACTTTGCTCCTGTAATTAATCATGTAGCAAGATATGCTTCTTCTGTAAAGGATGGCTCCCAGTATTTTGTGCTTCTGATTGTTACAGATGGTGTTATCTCAGATATGGCCCAGACTAAGGAGTCCATAGTTAATGCCTCAAAACTTCCAATGTCAATAATTATAGTAGGTGTTGGACCAGCAGAATTTGATGCAATGGTCGAATTGGATGGAGATGATGTAAGAGTCTCCTCTAGAGGAAAATATGCTGAAAGAGACATTGTGCAGTTTGTGCCATTCAGGGATTATATTGACAGAAGTGGAAACCACATACTGAGCATGGCTAGATTGGCTAAAGATGTCCTAGCTGAGATCCCTGAGCAGTTTCTCTCCTATATGAGAGCCCGAGGAATCAAGCCATCACCTGCGCCTCCCCCATACACCCCACCTACACATGTGTTACAGACTCAAATATGA
Amino sequence
MNPYQLNAYGMALKAVGEIVQDYDSDKMFPALGFGAKLPPDGRISHEFALNGNPQNPYCDGIEGVMEAYYRSLKSVQLYGPTNFAPVINHVARYASSVKDGSQYFVLLIVTDGVISDMAQTKESIVNASKLPMSIIIVGVGPAEFDAMVELDGDDVRVSSRGKYAERDIVQFVPFRDYIDRSGNHILSMARLAKDVLAEIPEQFLSYMRARGIKPSPAPPPYTPPTHVLQTQI*