ENST00000348761.2 CNTN1

Information
Transcript ID
ENST00000348761.2
Genome
hg19
Position
chr12:41,302,161-41,464,067
Strand
+
CDS length
3,024
Amino acid length
1,008
Gene symbol
CNTN1
Gene type
protein-coding
Gene description
contactin 1
Gene Entrez Gene ID
1272
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 41,302,161 41,302,295
2 41,312,441 41,312,573
3 41,316,058 41,316,230
4 41,318,359 41,318,454
5 41,323,598 41,323,804
6 41,327,263 41,327,362
7 41,327,499 41,327,680
8 41,330,583 41,330,707
9 41,331,372 41,331,489
10 41,333,137 41,333,287
11 41,337,399 41,337,526
12 41,337,797 41,337,972
13 41,352,916 41,353,036
14 41,374,711 41,374,869
15 41,386,922 41,387,071
16 41,408,030 41,408,100
17 41,410,484 41,410,718
18 41,414,139 41,414,242
19 41,418,952 41,419,138
20 41,421,659 41,421,771
21 41,422,865 41,423,021
22 41,463,761 41,464,067
CDS
Exon number Type Start Stop
1 CDS 41,302,235 41,302,295
2 CDS 41,312,441 41,312,573
3 CDS 41,316,058 41,316,230
4 CDS 41,318,359 41,318,454
5 CDS 41,323,598 41,323,804
6 CDS 41,327,263 41,327,362
7 CDS 41,327,499 41,327,680
8 CDS 41,330,583 41,330,707
9 CDS 41,331,372 41,331,489
10 CDS 41,333,137 41,333,287
11 CDS 41,337,399 41,337,526
12 CDS 41,337,797 41,337,972
13 CDS 41,352,916 41,353,036
14 CDS 41,374,711 41,374,869
15 CDS 41,386,922 41,387,071
16 CDS 41,408,030 41,408,100
17 CDS 41,410,484 41,410,718
18 CDS 41,414,139 41,414,242
19 CDS 41,418,952 41,419,138
20 CDS 41,421,659 41,421,771
21 CDS 41,422,865 41,423,021
22 CDS 41,463,761 41,463,837
Other genome
Genome Chromosome Start End Links
hg38 chr12 40,908,359 41,070,265 Link
CDS sequence
ATGAAAATGTGGTTGCTGGTCAGTCATCTTGTGATAATATCTATTACTACCTGTTTAGCAGTTTCTGAGGAAGACAAAGGATTTGGACCAATTTTTGAAGAGCAGCCAATCAATACCATTTATCCAGAGGAATCACTGGAAGGAAAAGTCTCACTCAACTGTAGGGCACGAGCCAGCCCTTTCCCGGTTTACAAATGGAGAATGAATAATGGGGACGTTGATCTCACAAGTGATCGATACAGTATGGTAGGAGGAAACCTTGTTATCAACAACCCTGACAAACAGAAAGATGCTGGAATATACTACTGTTTAGCATCTAATAACTACGGGATGGTCAGAAGCACTGAAGCAACCCTGAGCTTTGGATATCTTGATCCTTTCCCACCTGAGGAACGTCCTGAGGTCAGAGTAAAAGAAGGGAAAGGAATGGTGCTTCTCTGTGACCCCCCATACCATTTTCCAGATGATCTTAGCTATCGCTGGCTTCTAAATGAATTTCCTGTATTTATCACAATGGATAAACGGCGATTTGTGTCTCAGACAAATGGCAATCTCTACATTGCAAATGTTGAGGCTTCCGACAAAGGCAATTATTCCTGCTTTGTTTCCAGTCCTTCTATTACAAAGAGCGTGTTCAGCAAATTCATCCCACTCATTCCAATACCTGAACGAACAACAAAACCATATCCTGCTGATATTGTAGTTCAGTTCAAGGATGTATATGCATTGATGGGCCAAAATGTGACCTTAGAATGTTTTGCACTTGGAAATCCTGTTCCGGATATCCGATGGCGGAAGGTTCTAGAACCAATGCCAAGCACTGCTGAGATTAGCACCTCTGGGGCTGTTCTTAAGATCTTCAATATTCAGCTAGAAGATGAAGGCATCTATGAATGTGAGGCTGAGAACATTAGAGGAAAGGATAAACATCAAGCAAGAATTTATGTTCAAGCATTCCCTGAGTGGGTAGAACACATCAATGACACAGAGGTGGACATAGGCAGTGATCTCTACTGGCCTTGTGTGGCCACAGGAAAGCCCATCCCTACAATCCGATGGTTGAAAAATGGATATGCGTATCATAAAGGGGAATTAAGACTGTATGATGTGACTTTTGAAAATGCCGGAATGTATCAGTGCATAGCTGAAAACACATATGGAGCCATTTATGCAAATGCTGAGTTGAAGATCTTGGCGTTGGCTCCAACTTTTGAAATGAATCCTATGAAGAAAAAGATCCTGGCTGCTAAAGGTGGAAGGGTGATAATTGAATGCAAACCTAAAGCTGCACCGAAACCAAAGTTTTCATGGAGTAAAGGGACAGAGTGGCTTGTCAATAGCAGCAGAATACTCATTTGGGAAGATGGTAGCTTGGAAATCAACAACATTACAAGGAATGATGGAGGTATCTATACATGCTTTGCAGAAAATAACAGAGGGAAAGCTAATAGCACTGGAACCCTTGTTATCACAGATCCTACGCGAATTATATTGGCCCCAATTAATGCCGATATCACAGTTGGAGAAAACGCCACCATGCAGTGTGCTGCGTCCTTTGATCCTGCCTTGGATCTCACATTTGTTTGGTCCTTCAATGGCTATGTGATCGATTTTAACAAAGAGAATATTCACTACCAGAGGAATTTTATGCTGGATTCCAATGGGGAATTACTAATCCGAAATGCGCAGCTGAAACATGCTGGAAGATACACATGCACTGCCCAGACAATTGTGGACAATTCTTCAGCTTCAGCTGACCTTGTAGTGAGAGGCCCTCCAGGCCCTCCAGGTGGTCTGAGAATAGAAGACATTAGAGCCACTTCTGTGGCACTTACTTGGAGCCGTGGTTCAGACAATCATAGTCCTATTTCTAAATACACTATCCAGACCAAGACTATTCTTTCAGATGACTGGAAAGATGCAAAGACAGATCCCCCAATTATTGAAGGAAATATGGAGGCAGCAAGAGCAGTGGACTTAATCCCATGGATGGAGTATGAATTCCGCGTGGTAGCAACCAATACACTGGGTAGAGGAGAGCCCAGTATACCATCTAACAGAATTAAAACAGACGGTGCTGCACCAAATGTGGCTCCTTCAGATGTAGGAGGTGGAGGTGGAAGAAACAGAGAGCTGACCATAACATGGGCGCCTTTGTCAAGAGAATACCACTATGGCAACAATTTTGGTTACATAGTGGCATTTAAGCCATTTGATGGAGAAGAATGGAAAAAAGTCACAGTTACTAATCCTGATACTGGCCGATATGTCCATAAAGATGAAACCATGAGCCCTTCCACTGCATTTCAAGTTAAAGTCAAGGCCTTCAACAACAAAGGAGATGGACCTTACAGCCTAGTAGCAGTCATTAATTCAGCACAAGACGCTCCCAGTGAAGCCCCAACAGAAGTAGGTGTAAAAGTCTTATCATCTTCTGAGATATCTGTTCATTGGGAACATGTTTTAGAAAAAATAGTGGAAAGCTATCAGATTCGGTATTGGGCTGCCCATGACAAAGAAGAAGCTGCAAACAGAGTTCAAGTCACCAGCCAAGAGTACTCGGCCAGGCTCGAGAACCTTCTGCCAGACACCCAGTATTTTATAGAAGTCGGGGCCTGCAATAGTGCAGGGTGTGGACCTCCAAGTGACATGATTGAGGCTTTCACCAAGAAAGCACCTCCTAGCCAGCCTCCAAGGATCATCAGTTCAGTAAGGTCTGGTTCACGCTATATAATCACCTGGGATCATGTCGTTGCACTATCAAATGAATCTACAGTGACGGGATATAAGGTACTCTACAGACCTGATGGCCAGCATGATGGCAAGCTGTATTCAACTCACAAACACTCCATAGAAGTCCCAATCCCCAGAGATGGAGAATACGTTGTGGAGGTTCGCGCGCACAGTGATGGAGGAGATGGAGTGGTGTCTCAAGTCAAAATTTCAGGTGCACCCACCCTATCCCCAAGTCTTCTCGGCTTACTGCTGCCTGCCTTTGGCATCCTTGTCTACTTGGAATTCTGA
Amino sequence
MKMWLLVSHLVIISITTCLAVSEEDKGFGPIFEEQPINTIYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYDVTFENAGMYQCIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTNPDTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVLEKIVESYQIRYWAAHDKEEAANRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKAPPSQPPRIISSVRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQHDGKLYSTHKHSIEVPIPRDGEYVVEVRAHSDGGDGVVSQVKISGAPTLSPSLLGLLLPAFGILVYLEF*