ENST00000550413.2 AMIGO2

Information
Transcript ID
ENST00000550413.2
Genome
hg19
Position
chr12:47,470,230-47,473,742
Strand
-
CDS length
1,569
Amino acid length
523
Gene symbol
AMIGO2
Gene type
protein-coding
Gene description
adhesion molecule with Ig like domain 2
Gene Entrez Gene ID
347902
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
3 47,470,230 47,472,848
2 47,472,925 47,473,031
1 47,473,245 47,473,742
CDS
Exon number Type Start Stop
3 CDS 47,471,217 47,472,785
Other genome
Genome Chromosome Start End Links
hg38 chr12 47,076,447 47,079,959 Link
CDS sequence
ATGTCGTTACGTGTACACACTCTGCCCACCCTGCTTGGAGCCGTCGTCAGACCGGGCTGCAGGGAGCTGCTGTGTTTGCTGATGATCACAGTGACTGTGGGCCCTGGTGCCTCTGGGGTGTGCCCCACCGCTTGCATCTGTGCCACTGACATCGTCAGCTGCACCAACAAAAACCTGTCCAAGGTGCCTGGGAACCTTTTCAGACTGATTAAGAGACTGGACCTGAGTTATAACAGAATTGGGCTTCTGGATTCTGAGTGGATTCCAGTATCGTTTGCAAAGCTGAACACCCTAATTCTTCGTCATAACAACATCACCAGCATTTCCACGGGCAGTTTTTCCACAACTCCAAATTTGAAGTGTCTTGACTTATCGTCCAATAAGCTGAAGACGGTGAAAAATGCTGTATTCCAAGAGTTGAAGGTTCTGGAAGTGCTTCTGCTTTACAACAATCACATATCCTATCTCGATCCTTCAGCGTTTGGAGGGCTCTCCCAGTTGCAGAAACTCTACTTAAGTGGAAATTTTCTCACACAGTTTCCGATGGATTTGTATGTTGGAAGGTTCAAGCTGGCAGAACTGATGTTTTTAGATGTTTCTTATAACCGAATTCCTTCCATGCCAATGCACCACATAAATTTAGTGCCAGGAAAACAGCTGAGAGGCATCTACCTTCATGGAAACCCATTTGTCTGTGACTGTTCCCTGTACTCCTTGCTGGTCTTTTGGTATCGTAGGCACTTTAGCTCAGTGATGGATTTTAAGAACGATTACACCTGTCGCCTGTGGTCTGACTCCAGGCACTCGCGTCAGGTACTTCTGCTCCAGGATAGCTTTATGAATTGCTCTGACAGCATCATCAATGGTTCCTTTCGTGCGCTTGGCTTTATTCATGAGGCTCAGGTCGGGGAAAGACTGATGGTCCACTGTGACAGCAAGACAGGTAATGCAAATACGGATTTCATCTGGGTGGGTCCAGATAACAGACTGCTAGAGCCGGATAAAGAGATGGAAAACTTTTACGTGTTTCACAATGGAAGTCTGGTTATAGAAAGCCCTCGTTTTGAGGATGCTGGAGTGTATTCTTGTATCGCAATGAATAAGCAACGCCTGTTAAATGAAACTGTGGACGTCACAATAAATGTGAGCAATTTCACTGTAAGCAGATCCCATGCTCATGAGGCATTTAACACAGCTTTTACCACTCTTGCTGCTTGCGTGGCCAGTATCGTTTTGGTACTTTTGTACCTCTATCTGACTCCATGCCCCTGCAAGTGTAAAACCAAGAGACAGAAAAATATGCTACACCAAAGCAATGCCCATTCATCGATTCTCAGTCCTGGCCCCGCTAGTGATGCCTCCGCTGATGAACGGAAGGCAGGTGCAGGTAAAAGAGTGGTGTTTTTGGAACCCCTGAAGGATACTGCAGCAGGGCAGAACGGGAAAGTCAGGCTCTTTCCCAGCGAGGCAGTGATAGCTGAGGGCATCCTAAAGTCCACGAGGGGGAAATCTGACTCAGATTCAGTCAATTCAGTGTTTTCTGACACACCTTTTGTGGCGTCCACTTAA
Amino sequence
MSLRVHTLPTLLGAVVRPGCRELLCLLMITVTVGPGASGVCPTACICATDIVSCTNKNLSKVPGNLFRLIKRLDLSYNRIGLLDSEWIPVSFAKLNTLILRHNNITSISTGSFSTTPNLKCLDLSSNKLKTVKNAVFQELKVLEVLLLYNNHISYLDPSAFGGLSQLQKLYLSGNFLTQFPMDLYVGRFKLAELMFLDVSYNRIPSMPMHHINLVPGKQLRGIYLHGNPFVCDCSLYSLLVFWYRRHFSSVMDFKNDYTCRLWSDSRHSRQVLLLQDSFMNCSDSIINGSFRALGFIHEAQVGERLMVHCDSKTGNANTDFIWVGPDNRLLEPDKEMENFYVFHNGSLVIESPRFEDAGVYSCIAMNKQRLLNETVDVTINVSNFTVSRSHAHEAFNTAFTTLAACVASIVLVLLYLYLTPCPCKCKTKRQKNMLHQSNAHSSILSPGPASDASADERKAGAGKRVVFLEPLKDTAAGQNGKVRLFPSEAVIAEGILKSTRGKSDSDSVNSVFSDTPFVAST*