ENST00000547002.5 SLC48A1

Information
Transcript ID
ENST00000547002.5
Genome
hg19
Position
chr12:48,152,361-48,174,090
Strand
+
CDS length
270
Amino acid length
90
Gene symbol
SLC48A1
Gene type
protein-coding
Gene description
solute carrier family 48 member 1
Gene Entrez Gene ID
55652
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 48,152,361 48,152,443
2 48,153,999 48,154,184
3 48,165,953 48,166,103
4 48,172,811 48,172,978
5 48,173,928 48,174,090
CDS
Exon number Type Start Stop
4 CDS 48,172,846 48,172,978
5 CDS 48,173,928 48,174,064
Other genome
Genome Chromosome Start End Links
hg38 chr12 47,758,578 47,780,307 Link
CDS sequence
ATGTACATGCAAGATTATTGGAGGACCTGGCTCAAGGGGCTGCGCGGCTTCTTCTTCGTGGGCGTCCTCTTCTCGGCCGTCTCCATCGCTGCCTTCTGCACCTTCCTCGTGCTGGCCATCACCCGGCATCAGAGCCTCACAGACCCCACCAGCTACTACCTCTCCAGCGTCTGGAGCTTCATTTCCTTCAAGTGGGCCTTCCTGCTCAGCCTCTATGCCCACCGCTACCGGGCTGACTTTGCTGACATCAGCATCCTCAGCGATTTCTGA
Amino sequence
MYMQDYWRTWLKGLRGFFFVGVLFSAVSIAAFCTFLVLAITRHQSLTDPTSYYLSSVWSFISFKWAFLLSLYAHRYRADFADISILSDF*