ENST00000549518.6 SENP1
Information
- Transcript ID
- ENST00000549518.6
- Genome
- hg19
- Position
- chr12:48,436,680-48,499,862
- Strand
- -
- CDS length
- 1,935
- Amino acid length
- 645
- Gene symbol
- SENP1
- Gene type
- protein-coding
- Gene description
- SUMO specific peptidase 1
- Gene Entrez Gene ID
- 29843
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 18 | 48,436,680 | 48,439,167 |
| 17 | 48,440,139 | 48,440,234 |
| 16 | 48,440,761 | 48,440,845 |
| 15 | 48,441,784 | 48,441,863 |
| 14 | 48,442,712 | 48,442,915 |
| 13 | 48,457,493 | 48,457,624 |
| 12 | 48,458,848 | 48,459,003 |
| 11 | 48,459,379 | 48,459,463 |
| 10 | 48,460,710 | 48,460,748 |
| 9 | 48,465,450 | 48,465,504 |
| 8 | 48,468,107 | 48,468,390 |
| 7 | 48,468,473 | 48,468,576 |
| 6 | 48,477,374 | 48,477,545 |
| 5 | 48,482,584 | 48,482,743 |
| 4 | 48,490,126 | 48,490,210 |
| 3 | 48,491,777 | 48,491,907 |
| 2 | 48,495,252 | 48,495,299 |
| 1 | 48,499,811 | 48,499,862 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 18 | CDS | 48,439,105 | 48,439,167 |
| 17 | CDS | 48,440,139 | 48,440,234 |
| 16 | CDS | 48,440,761 | 48,440,845 |
| 15 | CDS | 48,441,784 | 48,441,863 |
| 14 | CDS | 48,442,712 | 48,442,915 |
| 13 | CDS | 48,457,493 | 48,457,624 |
| 12 | CDS | 48,458,848 | 48,459,003 |
| 11 | CDS | 48,459,379 | 48,459,463 |
| 10 | CDS | 48,460,710 | 48,460,748 |
| 9 | CDS | 48,465,450 | 48,465,504 |
| 8 | CDS | 48,468,107 | 48,468,390 |
| 7 | CDS | 48,468,473 | 48,468,576 |
| 6 | CDS | 48,477,374 | 48,477,545 |
| 5 | CDS | 48,482,584 | 48,482,743 |
| 4 | CDS | 48,490,126 | 48,490,210 |
| 3 | CDS | 48,491,777 | 48,491,907 |
| 2 | CDS | 48,495,252 | 48,495,255 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr12 | 48,042,897 | 48,106,079 | Link |
CDS sequence
ATGGATGATATTGCTGATAGGATGAGGATGGATGCTGGAGAAGTGACTTTAGTGAACCACAACTCCGTATTCAAAACCCACCTCCTGCCACAAACAGGTTTTCCAGAGGACCAGCTTTCGCTTTCTGACCAGCAGATTTTATCTTCCAGGCAAGGACATTTGGACCGATCTTTTACATGTTCCACAAGAAGTGCAGCTTATAATCCAAGCTATTACTCAGATAATCCTTCCTCAGACAGTTTTCTTGGCTCAGGCGATTTAAGAACCTTTGGCCAGAGTGCAAATGGCCAATGGAGAAATTCTACCCCATCGTCAAGCTCATCTTTACAAAAATCAAGAAACAGCCGAAGTCTTTACCTCGAAACCCGAAAGACCTCAAGTGGATTATCAAACAGTTTTGCGGGAAAGTCAAACCATCACTGCCATGTATCTGCATATGAAAAATCTTTTCCTATTAAACCTGTTCCAAGTCCATCTTGGAGTGGTTCATGTCGTCGAAGTCTTTTGAGCCCCAAGAAAACTCAGAGGCGACATGTTAGTACAGCAGAAGAGACAGTTCAAGAAGAAGAAAGAGAGATTTACAGACAGCTGCTACAGATGGTCACAGGGAAACAGTTTACTATAGCCAAACCCACCACACATTTTCCTTTACACCTGTCTCGATGTCTTAGTTCCAGTAAAAATACTTTGAAAGACTCACTGTTTAAAAATGGAAACTCTTGTGCATCTCAGATCATTGGCTCTGATACTTCATCATCTGGATCTGCCAGCATTTTAACTAACCAGGAACAGCTGTCCCACAGTGTATATTCCCTATCTTCTTATACCCCAGATGTTGCATTTGGATCCAAAGATTCTGGTACTCTTCATCATCCCCATCATCACCACTCTGTTCCACATCAGCCAGATAACTTAGCAGCTTCAAATACACAATCTGAAGGATCAGACTCTGTGATTTTACTGAAAGTGAAAGATTCCCAGACTCCAACTCCCAGTTCTACTTTCTTCCAGGCAGAGCTGTGGATCAAAGAATTAACTAGTGTTTATGATTCTCGAGCACGAGAAAGATTGCGCCAGATTGAAGAACAGAAGGCATTGGCCTTACAGCTTCAAAACCAGAGATTGCAGGAGCGGGAACATTCAGTACATGATTCAGTAGAACTACATCTTCGTGTACCTCTTGAAAAGGAGATTCCTGTTACTGTTGTCCAAGAAACACAAAAAAAAGGTCATAAATTAACTGATAGTGAAGATGAATTTCCTGAAATTACAGAGGAAATGGAGAAAGAAATAAAGAATGTATTTCGTAATGGGAATCAGGATGAAGTTCTCAGTGAAGCATTTCGCCTGACCATTACACGCAAAGATATTCAAACTCTAAACCATCTGAATTGGCTCAATGATGAGATCATCAATTTCTACATGAATATGCTGATGGAGCGAAGTAAAGAGAAGGGCTTGCCAAGTGTGCATGCATTTAATACCTTTTTCTTCACTAAATTAAAAACGGCTGGTTATCAGGCAGTGAAACGTTGGACAAAGAAAGTAGATGTATTTTCTGTTGACATTCTTTTGGTGCCCATTCACCTGGGAGTACACTGGTGTCTAGCTGTTGTGGACTTTAGAAAGAAGAATATTACCTATTACGACTCCATGGGTGGGATAAACAATGAAGCCTGCAGAATACTCTTGCAATACCTAAAGCAAGAAAGCATTGACAAGAAAAGGAAAGAGTTTGACACCAATGGCTGGCAGCTTTTCAGCAAGAAAAGCCAGGAGATTCCTCAGCAGATGAATGGAAGTGACTGTGGGATGTTTGCCTGCAAATATGCTGACTGTATTACCAAAGACAGACCAATCAACTTCACACAGCAACACATGCCATACTTCCGGAAGCGGATGGTCTGGGAGATCCTCCACCGAAAACTCTTGTGA
Amino sequence
MDDIADRMRMDAGEVTLVNHNSVFKTHLLPQTGFPEDQLSLSDQQILSSRQGHLDRSFTCSTRSAAYNPSYYSDNPSSDSFLGSGDLRTFGQSANGQWRNSTPSSSSSLQKSRNSRSLYLETRKTSSGLSNSFAGKSNHHCHVSAYEKSFPIKPVPSPSWSGSCRRSLLSPKKTQRRHVSTAEETVQEEEREIYRQLLQMVTGKQFTIAKPTTHFPLHLSRCLSSSKNTLKDSLFKNGNSCASQIIGSDTSSSGSASILTNQEQLSHSVYSLSSYTPDVAFGSKDSGTLHHPHHHHSVPHQPDNLAASNTQSEGSDSVILLKVKDSQTPTPSSTFFQAELWIKELTSVYDSRARERLRQIEEQKALALQLQNQRLQEREHSVHDSVELHLRVPLEKEIPVTVVQETQKKGHKLTDSEDEFPEITEEMEKEIKNVFRNGNQDEVLSEAFRLTITRKDIQTLNHLNWLNDEIINFYMNMLMERSKEKGLPSVHAFNTFFFTKLKTAGYQAVKRWTKKVDVFSVDILLVPIHLGVHWCLAVVDFRKKNITYYDSMGGINNEACRILLQYLKQESIDKKRKEFDTNGWQLFSKKSQEIPQQMNGSDCGMFACKYADCITKDRPINFTQQHMPYFRKRMVWEILHRKLL*