ENST00000548364.7 C12orf54
Information
- Transcript ID
- ENST00000548364.7
- Genome
- hg19
- Position
- chr12:48,876,281-48,890,307
- Strand
- +
- CDS length
- 384
- Amino acid length
- 128
- Gene symbol
- C12orf54
- Gene type
- protein-coding
- Gene description
- chromosome 12 open reading frame 54
- Gene Entrez Gene ID
- 121273
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 48,876,281 | 48,876,359 |
| 2 | 48,877,023 | 48,877,144 |
| 3 | 48,879,961 | 48,879,991 |
| 4 | 48,880,471 | 48,880,509 |
| 5 | 48,882,707 | 48,882,739 |
| 6 | 48,884,595 | 48,884,619 |
| 7 | 48,886,730 | 48,886,778 |
| 8 | 48,888,581 | 48,888,762 |
| 9 | 48,889,964 | 48,890,307 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 48,877,080 | 48,877,144 |
| 3 | CDS | 48,879,961 | 48,879,991 |
| 4 | CDS | 48,880,471 | 48,880,509 |
| 5 | CDS | 48,882,707 | 48,882,739 |
| 6 | CDS | 48,884,595 | 48,884,619 |
| 7 | CDS | 48,886,730 | 48,886,778 |
| 8 | CDS | 48,888,581 | 48,888,722 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr12 | 48,482,498 | 48,496,524 | Link |
CDS sequence
ATGGCACAGCATCCCTGCCAGGATCAGGAACAAAAGGTAGAAATGACCTCCAAGCAGCAGAGAAGCACATCCATAGAAGAGACAATGAGACCACAGGAAAAACAGGTAACCATCACTGAAACCCTGTGGGACCAGGTGCTGACAGTTTTTAAGGATATACAAAAGGAGCTGCAGGAAGATGCTCGGATTCGAGGGATGAGCAACTGCTCCATGACACCCATGACATCAGCACCCAGGACTGGAAGCATAAGGCCTCCAGATTCCTTGATGACCCCAAAGTTGAGAAGATTGCAGTTCAGCTCTGGAGAGCAGCCATCAGGAGGCCGTATCCACAACCTGAAGACACAGCTCTTCAGTCAATCAGCTTACTACCCTGGACCCTAA
Amino sequence
MAQHPCQDQEQKVEMTSKQQRSTSIEETMRPQEKQVTITETLWDQVLTVFKDIQKELQEDARIRGMSNCSMTPMTSAPRTGSIRPPDSLMTPKLRRLQFSSGEQPSGGRIHNLKTQLFSQSAYYPGP*