ENST00000552397.5 GTSF1

Information
Transcript ID
ENST00000552397.5
Genome
hg19
Position
chr12:54,849,738-54,866,411
Strand
-
CDS length
504
Amino acid length
168
Gene symbol
GTSF1
Gene type
protein-coding
Gene description
gametocyte specific factor 1
Gene Entrez Gene ID
121355
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
9 54,849,738 54,849,937
8 54,852,873 54,852,909
7 54,854,161 54,854,255
6 54,855,893 54,855,956
5 54,856,426 54,856,509
4 54,856,955 54,857,081
3 54,858,851 54,858,951
2 54,865,017 54,865,061
1 54,865,544 54,866,411
CDS
Exon number Type Start Stop
8 CDS 54,852,893 54,852,909
7 CDS 54,854,161 54,854,255
6 CDS 54,855,893 54,855,956
5 CDS 54,856,426 54,856,509
4 CDS 54,856,955 54,857,081
3 CDS 54,858,851 54,858,951
2 CDS 54,865,017 54,865,032
Other genome
Genome Chromosome Start End Links
hg38 chr12 54,455,954 54,472,627 Link
CDS sequence
ATGGAAGAAACTTACACCGACTCCCTGGACCCTGAGAAGCTATTGCAATGCCCCTATGACAAAAACCATCAAATCAGGGCTTGCAGGTTTCCTTATCATCTTATCAAGTGCAGAAAGAATCATCCTGATGTTGCAAGCAAATTGGCTACTTGTCCCTTCAATGCTCGCCACCAGGTTCCTCGAGCTGAAATTAGTCATCATATCTCAAGCTGTGATGACAGAAGTTGTATTGAGCAAGATGTTGTCAACCAAACCAGGAGCCTTAGACAAGAGACTCTGGCTGAGAGCACTTGGCAGTGCCCTCCTTGCGATGAAGACTGGGATAAAGATTTGTGGGAGCAGACCAGCACCCCATTTGTCTGGGGCACAACTCACTACTCTGACAACAACAGCCCTGCGAGCAACATAGTTACAGAACATAAGAATAACCTGGCTTCAGGCATGCGAGTTCCCAAATCTCTGCCGTATGTTCTGCCATGGAAAAACAATGGAAATGCACAGTAA
Amino sequence
MEETYTDSLDPEKLLQCPYDKNHQIRACRFPYHLIKCRKNHPDVASKLATCPFNARHQVPRAEISHHISSCDDRSCIEQDVVNQTRSLRQETLAESTWQCPPCDEDWDKDLWEQTSTPFVWGTTHYSDNNSPASNIVTEHKNNLASGMRVPKSLPYVLPWKNNGNAQ*