ENST00000257905.13 PPP1R1A

Information
Transcript ID
ENST00000257905.13
Genome
hg19
Position
chr12:54,973,030-54,982,443
Strand
-
CDS length
516
Amino acid length
172
Gene symbol
PPP1R1A
Gene type
protein-coding
Gene description
protein phosphatase 1 regulatory inhibitor subunit 1A
Gene Entrez Gene ID
5502
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
7 54,973,030 54,974,176
6 54,974,728 54,974,834
5 54,975,760 54,975,915
4 54,976,516 54,976,579
3 54,976,995 54,977,032
2 54,978,044 54,978,104
1 54,982,189 54,982,443
CDS
Exon number Type Start Stop
7 CDS 54,974,171 54,974,176
6 CDS 54,974,728 54,974,834
5 CDS 54,975,760 54,975,915
4 CDS 54,976,516 54,976,579
3 CDS 54,976,995 54,977,032
2 CDS 54,978,044 54,978,104
1 CDS 54,982,189 54,982,272
Other genome
Genome Chromosome Start End Links
hg38 chr12 54,579,246 54,588,659 Link
CDS sequence
ATGGAGCAAGACAACAGCCCCCGAAAGATCCAGTTCACGGTCCCGCTGCTGGAGCCGCACCTTGACCCCGAGGCGGCGGAGCAGATTCGGAGGCGCCGCCCCACCCCTGCCACCCTCGTGCTGACCAGTGACCAGTCATCCCCAGAGATAGATGAAGACCGGATCCCCAACCCACATCTCAAGTCCACTTTGGCAATGTCTCCACGGCAACGGAAGAAGATGACAAGGATCACACCCACAATGAAAGAGCTCCAGATGATGGTTGAACATCACCTGGGGCAACAGCAGCAAGGAGAGGAACCTGAGGGGGCCGCTGAGAGCACAGAAACCCAGGAGTCCCGCCCACCTGGGATCCCAGACACAGAAGTGGAGTCAAGGCTGGGCACCTCTGGGACAGCAAAAAAAACTGCAGAATGCATCCCTAAAACTCACGAGAGAGGCAGTAAGGAACCCAGCACAAAAGAACCCTCAACCCATATACCACCACTGGATTCCAAGGGAGCCAACTCGGTCTGA
Amino sequence
MEQDNSPRKIQFTVPLLEPHLDPEAAEQIRRRRPTPATLVLTSDQSSPEIDEDRIPNPHLKSTLAMSPRQRKKMTRITPTMKELQMMVEHHLGQQQQGEEPEGAAESTETQESRPPGIPDTEVESRLGTSGTAKKTAECIPKTHERGSKEPSTKEPSTHIPPLDSKGANSV*