ENST00000449076.6 TESPA1

Information
Transcript ID
ENST00000449076.6
Genome
hg19
Position
chr12:55,341,799-55,378,546
Strand
-
CDS length
1,566
Amino acid length
522
Gene symbol
TESPA1
Gene type
protein-coding
Gene description
thymocyte expressed, positive selection associated 1
Gene Entrez Gene ID
9840
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
11 55,341,799 55,344,174
10 55,354,952 55,355,051
9 55,356,215 55,357,026
8 55,357,526 55,357,734
7 55,359,837 55,359,935
6 55,360,172 55,360,208
5 55,360,967 55,361,020
4 55,361,627 55,361,676
3 55,367,261 55,367,303
2 55,368,184 55,368,391
1 55,378,369 55,378,546
CDS
Exon number Type Start Stop
10 CDS 55,354,953 55,355,051
9 CDS 55,356,215 55,357,026
8 CDS 55,357,526 55,357,734
7 CDS 55,359,837 55,359,935
6 CDS 55,360,172 55,360,208
5 CDS 55,360,967 55,361,020
4 CDS 55,361,627 55,361,676
3 CDS 55,367,261 55,367,303
2 CDS 55,368,184 55,368,346
Other genome
Genome Chromosome Start End Links
hg38 chr12 54,948,015 54,984,762 Link
CDS sequence
ATGGAGGCCTCTGTGCTGAGCCCCACATCCTGGGAGAAACGGCGGGCCTGGCTCCGTCAGAGCCGTAACTGGCAGACCCAGGTCCTAGAAGAGGAGGCTGCCGCCGCCCTGCAGGATGTCCCAGATCCTGAGCCTTCCAGCCTGGATGACGTTTTCCAAGAAGGGAATCCAATCAATAAAATTGAAGACTGGCTGCAGGATTGCGGATACTCTGAAGAAGGATTTTCTGAGGAAGCAGGACAGTTTATCTACAATGGCTTCTGCAGCCATGGGACCAGCTTTGAAGATGACTTGACCCTGGGAGCGGAGGCCACACTACTGGCCGCCAATGGCAAACTCTTCTCCAGGAGTTTCCTCGAGACAGCCAGGCCTTGCCAGCTACTTGATCTTGGCTGTAGTTTGGCTTCCAGCAGCATGACTGGGGGGACCAACAAGACTAGTTCAAGCATCTCAGAAATTCTGGACAAAGTGCAAGAAGATGCAGAAGATGTCCTCTTCAGTCTGGGCTTTGGCCAAGAGGATCACAAAGACACTTCTCGGATACCCGCCCGATTTTTCACCACCCCCTCTCAGGCCAAGGGCATTGATTTCCAGCTCTTCCTGAAGTCCCAGGTGCGGAGGATTGAAATGGAAGACCCCTGCCTCATGCTGGCCAGCAGGTTTAAGCAGGTGCAAACACTGGCTGTCACTGCTGATGCCTTCTTCTGTCTCTACTCCTATGTGTCTAAGACACCTGTCCAAAAGTTCACACCATCCCACATGTTCTGGAATTGCAACCATCCAACTGATGTGCCATCCATCAGGATTCTGTCCCGAGAGCCTGAACCCCAGTCACCCAGAGACCGCCTTCGGAAAGCCATCTCCAAGATGTGTCTGTACACATGCCCCCGAGACCGGCCACCACCACCCCACAACACCCCCAAAAGGAACAGTTTGGACCAAGTTGTGTTGGAAGTGATGGACAAAGTGAAAGAAGAGAAGCAGTTCCTCCAGCAAGACTCTGATTTGGGGCAATTCTCACAGGAAGATCCTGTGCCCCCTGCTGAGGGTAAGAAGTTGCCCACTTCTCCCTATCCATGTGTCTTCTGCTGTGAAGAGGAAACACAGCAGAGGATGTCCACAGTGCTAGCACCATCCCAAACTCTGGATTCGAACCCCAAGGTACCCTGTTGCACACATTCTCTGCCCATAGAAGATCCACAGTGGAGCACAGACCCAGCTCAGATAAGGAGAGAGCTGTGTAGTCTACCAGCCACCAATACGGAAACCCATCCAGCCAAGGATGAGACTTTCTGGAAAAGAAAGAGCAGAGCAAGAAAGAGCCTCTTCCAGAAGAATCTCATGGGCAGGAAGGTTAAGTCCTTGGACCTGTCCATCACCCAGCAGAAATGGAAGCAGAGTGTAGACAGACCAGAACTGCGTCGGTCTTTAAGCCAGCAGCCACAGGACACTTTTGACTTGGAGGAGGTGCAAAGCAACAGTGAGGAGGAGCAGAGTCAGAGTCGCTGGCCCAGCAGACCCAGGCACCCCCACCACCACCAGACTTTTGCTGGCAAAGACTCGTGA
Amino sequence
MEASVLSPTSWEKRRAWLRQSRNWQTQVLEEEAAAALQDVPDPEPSSLDDVFQEGNPINKIEDWLQDCGYSEEGFSEEAGQFIYNGFCSHGTSFEDDLTLGAEATLLAANGKLFSRSFLETARPCQLLDLGCSLASSSMTGGTNKTSSSISEILDKVQEDAEDVLFSLGFGQEDHKDTSRIPARFFTTPSQAKGIDFQLFLKSQVRRIEMEDPCLMLASRFKQVQTLAVTADAFFCLYSYVSKTPVQKFTPSHMFWNCNHPTDVPSIRILSREPEPQSPRDRLRKAISKMCLYTCPRDRPPPPHNTPKRNSLDQVVLEVMDKVKEEKQFLQQDSDLGQFSQEDPVPPAEGKKLPTSPYPCVFCCEEETQQRMSTVLAPSQTLDSNPKVPCCTHSLPIEDPQWSTDPAQIRRELCSLPATNTETHPAKDETFWKRKSRARKSLFQKNLMGRKVKSLDLSITQQKWKQSVDRPELRRSLSQQPQDTFDLEEVQSNSEEEQSQSRWPSRPRHPHHHQTFAGKDS*