ENST00000408946.7 PYM1

Information
Transcript ID
ENST00000408946.7
Genome
hg19
Position
chr12:56,295,197-56,321,678
Strand
-
CDS length
615
Amino acid length
205
Gene symbol
PYM1
Gene type
protein-coding
Gene description
PYM homolog 1, exon junction complex associated factor
Gene Entrez Gene ID
84305
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
3 56,295,197 56,296,139
2 56,297,171 56,297,264
1 56,321,509 56,321,678
CDS
Exon number Type Start Stop
3 CDS 56,295,656 56,296,139
2 CDS 56,297,171 56,297,264
1 CDS 56,321,509 56,321,545
Other genome
Genome Chromosome Start End Links
hg38 chr12 55,901,413 55,927,894 Link
CDS sequence
ATGGAAGCTGCCGGCAGCCCTGCGGCTACGGAGACAGGCAAGTATATCGCGTCAACACAGCGACCTGACGGGACCTGGCGCAAGCAGCGGAGGGTGAAAGAAGGATATGTGCCCCAGGAGGAGGTCCCAGTATATGAAAACAAGTATGTGAAGTTTTTCAAGAGTAAACCAGAGTTGCCCCCAGGGCTAAGCCCTGAGGCCACTGCTCCTGTCACCCCATCCAGGCCTGAAGGTGGTGAACCAGGCCTCTCCAAGACAGCCAAACGTAACCTGAAGCGAAAGGAGAAGAGGCGGCAGCAGCAAGAGAAAGGAGAGGCAGAGGCCTTGAGCAGGACTCTTGATAAGGTGTCCCTGGAAGAGACAGCCCAACTCCCCAGTGCTCCACAGGGCTCTCGGGCAGCCCCCACAGCTGCATCTGACCAGCCTGACTCAGCTGCCACCACTGAGAAAGCCAAGAAGATAAAGAACCTAAAGAAGAAACTCCGGCAGGTGGAAGAGCTGCAGCAGCGGATCCAGGCTGGGGAAGTCAGCCAGCCTAGCAAAGAGCAGCTAGAAAAGCTAGCAAGGAGGAGGGCGCTAGAAGAGGAGTTAGAGGACTTGGAGTTAGGCCTCTGA
Amino sequence
MEAAGSPAATETGKYIASTQRPDGTWRKQRRVKEGYVPQEEVPVYENKYVKFFKSKPELPPGLSPEATAPVTPSRPEGGEPGLSKTAKRNLKRKEKRRQQQEKGEAEALSRTLDKVSLEETAQLPSAPQGSRAAPTAASDQPDSAATTEKAKKIKNLKKKLRQVEELQQRIQAGEVSQPSKEQLEKLARRRALEEELEDLELGL*