ENST00000550164.6 SMARCC2

Information
Transcript ID
ENST00000550164.6
Genome
hg19
Position
chr12:56,556,143-56,583,267
Strand
-
CDS length
3,738
Amino acid length
1,246
Gene symbol
SMARCC2
Gene type
protein-coding
Gene description
SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2
Gene Entrez Gene ID
6601
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
29 56,556,143 56,557,549
28 56,558,087 56,558,515
27 56,559,102 56,559,483
26 56,561,844 56,561,978
25 56,563,313 56,563,479
24 56,563,560 56,563,695
23 56,563,928 56,563,992
22 56,565,055 56,565,216
21 56,565,463 56,565,721
20 56,566,212 56,566,274
19 56,566,369 56,566,488
18 56,566,721 56,566,813
17 56,567,480 56,567,633
16 56,568,435 56,568,548
15 56,571,806 56,571,877
14 56,572,188 56,572,318
13 56,572,594 56,572,631
12 56,572,781 56,572,840
11 56,574,761 56,574,885
10 56,575,266 56,575,381
9 56,575,488 56,575,619
8 56,575,788 56,575,863
7 56,577,645 56,577,714
6 56,577,959 56,578,028
5 56,578,628 56,578,720
4 56,578,814 56,578,895
3 56,579,939 56,580,024
2 56,580,971 56,581,090
1 56,583,135 56,583,267
CDS
Exon number Type Start Stop
29 CDS 56,557,473 56,557,549
28 CDS 56,558,087 56,558,515
27 CDS 56,559,102 56,559,483
26 CDS 56,561,844 56,561,978
25 CDS 56,563,313 56,563,479
24 CDS 56,563,560 56,563,695
23 CDS 56,563,928 56,563,992
22 CDS 56,565,055 56,565,216
21 CDS 56,565,463 56,565,721
20 CDS 56,566,212 56,566,274
19 CDS 56,566,369 56,566,488
18 CDS 56,566,721 56,566,813
17 CDS 56,567,480 56,567,633
16 CDS 56,568,435 56,568,548
15 CDS 56,571,806 56,571,877
14 CDS 56,572,188 56,572,318
13 CDS 56,572,594 56,572,631
12 CDS 56,572,781 56,572,840
11 CDS 56,574,761 56,574,885
10 CDS 56,575,266 56,575,381
9 CDS 56,575,488 56,575,619
8 CDS 56,575,788 56,575,863
7 CDS 56,577,645 56,577,714
6 CDS 56,577,959 56,578,028
5 CDS 56,578,628 56,578,720
4 CDS 56,578,814 56,578,895
3 CDS 56,579,939 56,580,024
2 CDS 56,580,971 56,581,090
1 CDS 56,583,135 56,583,245
Other genome
Genome Chromosome Start End Links
hg38 chr12 56,162,359 56,189,483 Link
CDS sequence
ATGGCGGTGCGGAAGAAGGACGGCGGCCCCAACGTGAAGTACTACGAGGCCGCGGACACCGTGACCCAGTTCGACAACGTGCGGCTGTGGCTCGGCAAGAACTACAAGAAGTATATACAAGCTGAACCACCCACCAACAAGTCCCTGTCTAGCCTGGTTGTACAGTTGCTACAATTTCAGGAAGAAGTTTTTGGCAAACATGTCAGCAATGCACCGCTCACTAAACTGCCGATCAAATGTTTCCTAGATTTCAAAGCGGGAGGCTCCTTGTGCCACATTCTTGCAGCTGCCTACAAATTCAAGAGTGACCAGGGATGGCGGCGTTACGATTTCCAGAATCCATCACGCATGGACCGCAATGTGGAAATGTTTATGACCATTGAGAAGTCCTTGGTGCAGAATAATTGCCTGTCTCGACCTAACATTTTTCTGTGCCCAGAAATTGAGCCCAAACTACTAGGGAAATTAAAGGACATTATCAAGAGACACCAGGGAACAGTCACTGAGGATAAGAACAATGCCTCCCATGTTGTGTATCCTGTCCCGGGGAATCTAGAAGAAGAGGAATGGGTACGACCAGTCATGAAGAGGGATAAGCAGGTTCTTCTGCACTGGGGCTACTATCCTGACAGTTACGACACGTGGATCCCAGCGAGTGAAATTGAGGCATCTGTGGAAGATGCTCCAACTCCTGAGAAACCTAGGAAGGTTCATGCAAAGTGGATCCTGGACACCGACACCTTCAATGAATGGATGAATGAGGAAGACTATGAAGTAAATGATGACAAAAACCCTGTCTCCCGCCGAAAGAAGATTTCAGCCAAGACACTGACAGATGAGGTGAACAGCCCAGATTCAGATCGACGGGACAAGAAGGGGGGAAACTATAAGAAGAGGAAGCGCTCCCCCTCTCCTTCACCAACCCCAGAAGCAAAGAAGAAAAATGCTAAGAAAGGTCCCTCAACACCTTACACTAAGTCAAAGCGTGGCCACAGAGAAGAGGAGCAAGAAGACCTGACAAAGGACATGGACGAGCCCTCACCAGTCCCCAATGTAGAAGAGGTGACACTTCCCAAAACAGTCAACACAAAGAAAGACTCAGAGTCGGCCCCAGTCAAAGGCGGCACCATGACCGACCTGGATGAACAGGAAGATGAAAGCATGGAGACGACGGGCAAGGATGAGGATGAGAACAGTACGGGGAACAAGGGAGAGCAGACCAAGAATCCAGACCTGCATGAGGACAATGTGACTGAACAGACCCACCACATCATCATTCCCAGCTACGCTGCCTGGTTTGACTACAATAGTGTTCATGCCATTGAGCGGAGGGCTCTCCCCGAGTTCTTCAACGGCAAGAACAAGTCCAAGACTCCAGAGATCTACCTGGCCTATCGAAACTTTATGATTGACACTTACCGACTGAACCCCCAAGAGTATCTTACCTCTACCGCCTGCCGCCGAAACCTAGCGGGTGATGTCTGTGCCATCATGAGGGTCCATGCCTTCCTAGAACAGTGGGGTCTTATTAACTACCAGGTGGATGCTGAGAGTCGACCAACCCCAATGGGGCCTCCGCCTACCTCTCACTTCCATGTCTTGGCTGACACACCATCAGGGCTGGTGCCTCTGCAGCCCAAGACACCTCAGGGCCGCCAGGTTGATGCTGATACCAAGGCTGGGCGAAAGGGCAAAGAGCTGGATGACCTGGTGCCAGAGACGGCTAAGGGCAAGCCAGAGCTGCAGACCTCTGCTTCCCAACAAATGCTCAACTTTCCTGACAAAGGCAAAGAGAAACCAACAGACATGCAAAACTTTGGGCTGCGCACAGACATGTACACAAAAAAGAATGTTCCCTCCAAGAGCAAGGCTGCAGCCAGTGCCACTCGTGAGTGGACAGAACAGGAAACCCTGCTTCTCCTGGAGGCACTGGAAATGTACAAAGATGACTGGAACAAAGTGTCCGAGCATGTGGGAAGCCGCACACAGGACGAGTGCATCTTGCATTTTCTTCGTCTTCCCATTGAAGACCCATACCTGGAGGACTCAGAGGCCTCCCTAGGCCCCCTGGCCTACCAACCCATCCCCTTCAGTCAGTCGGGCAACCCTGTTATGAGCACTGTTGCCTTCCTGGCCTCTGTCGTCGATCCCCGAGTCGCCTCTGCTGCTGCAAAGTCAGCCCTAGAGGAGTTCTCCAAAATGAAGGAAGAGGTACCCACGGCCTTGGTGGAGGCCCATGTTCGAAAAGTGGAAGAAGCAGCCAAAGTAACAGGCAAGGCGGACCCTGCCTTCGGTCTGGAAAGCAGTGGCATTGCAGGAACCACCTCTGATGAGCCTGAGCGGATTGAGGAGAGCGGGAATGACGAGGCTCGGGTGGAAGGCCAGGCCACAGATGAGAAGAAGGAGCCCAAGGAACCCCGAGAAGGAGGGGGTGCTATAGAGGAGGAAGCAAAAGAGAAAACCAGCGAGGCTCCCAAGAAGGATGAGGAGAAAGGGAAAGAAGGCGACAGTGAGAAGGAGTCCGAGAAGAGTGATGGAGACCCAATAGTCGATCCTGAGAAGGAGAAGGAGCCAAAGGAAGGGCAGGAGGAAGTGCTGAAGGAAGTGGTGGAGTCTGAGGGGGAAAGGAAGACAAAGGTGGAGCGGGACATTGGCGAGGGCAACCTCTCCACCGCTGCTGCCGCCGCCCTGGCCGCCGCCGCAGTGAAAGCTAAGCACTTGGCTGCTGTTGAGGAAAGGAAGATCAAATCTTTGGTGGCCCTGCTGGTGGAGACCCAGATGAAAAAGTTGGAGATCAAACTTCGGCACTTTGAGGAGCTGGAGACTATCATGGACCGGGAGCGAGAAGCACTGGAGTATCAGAGGCAGCAGCTCCTGGCCGACAGACAAGCCTTCCACATGGAGCAGCTGAAGTATGCGGAGATGAGGGCTCGGCAGCAGCACTTCCAACAGATGCACCAACAGCAGCAGCAGCCACCACCAGCCCTGCCCCCAGGCTCCCAGCCTATCCCCCCAACAGGGGCTGCTGGGCCACCCGCAGTCCATGGCTTGGCTGTGGCTCCAGCCTCTGTAGTCCCTGCTCCTGCTGGCAGTGGGGCCCCTCCAGGAAGTTTGGGCCCTTCTGAACAGATTGGGCAGGCAGGGTCAACTGCAGGGCCACAGCAGCAGCAACCAGCTGGAGCCCCCCAGCCTGGGGCAGTCCCACCAGGGGTTCCCCCCCCTGGACCCCATGGCCCCTCACCGTTCCCCAACCAACAAACTCCTCCCTCAATGATGCCAGGGGCAGTGCCAGGCAGCGGGCACCCAGGCGTGGCGGGTAATGCTCCTTTGGGTTTGCCTTTTGGCATGCCGCCTCCTCCTCCTCCTCCTGCTCCATCCATCATCCCATTTGGTAGTCTAGCTGACTCCATCAGTATTAACCTCCCCGCTCCTCCTAACCTGCATGGGCATCACCACCATCTCCCGTTCGCCCCGGGCACTCTCCCCCCACCTAACCTGCCTGTGTCCATGGCGAACCCTCTACATCCTAACCTGCCGGCGACCACCACCATGCCATCTTCCTTGCCTCTCGGGCCGGGGCTCGGATCCGCCGCAGCCCAAAGCCCTGCCATTGTGGCAGCTGTTCAGGGCAACCTCCTGCCCAGTGCCAGCCCACTGCCAGACCCAGGCACCCCCCTGCCTCCAGACCCCACAGCCCCGAGCCCAGGCACGGTCACCCCTGTGCCACCTCCACAGTGA
Amino sequence
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYPVPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAKWILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSGLVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKPTDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ*