ENST00000706567.1 PRIM1

Information
Transcript ID
ENST00000706567.1
Genome
hg19
Position
chr12:57,127,566-57,146,158
Strand
-
CDS length
1,278
Amino acid length
426
Gene symbol
PRIM1
Gene type
protein-coding
Gene description
DNA primase subunit 1
Gene Entrez Gene ID
5557
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
12 57,127,566 57,128,029
11 57,132,218 57,132,309
10 57,133,078 57,133,147
9 57,135,219 57,135,360
8 57,135,530 57,135,621
7 57,136,771 57,136,880
6 57,137,849 57,137,907
5 57,139,829 57,139,965
4 57,140,565 57,140,638
3 57,140,710 57,140,816
2 57,144,822 57,144,979
1 57,145,980 57,146,158
CDS
Exon number Type Start Stop
12 CDS 57,127,896 57,128,029
11 CDS 57,132,218 57,132,309
10 CDS 57,133,078 57,133,147
9 CDS 57,135,219 57,135,360
8 CDS 57,135,530 57,135,621
7 CDS 57,136,771 57,136,880
6 CDS 57,137,849 57,137,907
5 CDS 57,139,829 57,139,965
4 CDS 57,140,565 57,140,638
3 CDS 57,140,710 57,140,816
2 CDS 57,144,822 57,144,979
1 CDS 57,145,980 57,146,082
Other genome
Genome Chromosome Start End Links
hg38 chr12 56,733,782 56,752,374 Link
CDS sequence
ATGGAGACGTTTGACCCCACCGAGCTGCCCGAGCTGCTTAAACTTTATTACCGGAGGCTCTTTCCCTACTCTCAGTACTATCGCTGGCTCAACTACGGTGGAGTGATAAAGAATTACTTTCAACACCGTGAATTTTCATTCACATTGAAAGATGATATTTACATTCGCTACCAATCCTTCAACAACCAGAGTGATCTGGAAAAGGAGATGCAGAAAATGAATCCATACAAGATTGATATAGGCGCAGTATATTCTCACAGACCCAATCAACACAATACAGTGAAGCTGGGAGCTTTCCAGGCTCAGGAAAAAGAACTGGTATTTGACATTGACATGACAGACTATGACGATGTGAGGAGATGTTGTAGTTCTGCAGACATATGTCCTAAGTGCTGGACCCTCATGACAATGGCCATACGCATCATTGACAGAGCATTGAAGGAGGACTTTGGATTTAAGCATCGTCTCTGGGTATATTCTGGAAGGAGAGGTGTTCATTGTTGGGTCTGTGATGAATCAGTTAGAAAACTGTCTTCTGCAGTACGTTCTGGGATAGTTGAGTATTTGAGCCTTGTAAAGGGTGGTCAAGACGTTAAAAAGAAAGTTCACCTAAGTGAAAAAATTCACCCTTTTATCAGAAAATCTATAAACATAATAAAAAAATACTTTGAAGAATATGCCTTGGTTAATCAAGATATTCTCGAAAATAAAGAAAGCTGGGATAAGATTTTAGCCCTTGTTCCTGAAACAATTCATGATGAACTTCAACAAAGCTTCCAAAAGTCTCACAATTCACTTCAGCGTTGGGAGCACTTGAAGAAAGTAGCCAGCAGATATCAGAATAACATCAAAAATGACAAATATGGACCCTGGCTGGAGTGGGAGATTATGCTCCAGTACTGTTTTCCACGGCTGGATATCAATGTCAGCAAAGGAATCAATCATCTACTGAAGAGCCCTTTTAGTGTTCATCCTAAAACAGGTCGCATATCTGTGCCTATTGATTTGCAGAAAGTGGACCAGTTTGATCCATTTACTGTTCCGACCATAAGCTTCATCTGCCGTGAATTGGATGCCATTTCCACTAATGAAGAGGAAAAAGAGGAGAATGAAGCTGAATCTGATGTCAAACATAGAACCAGAGATTATAAGAAGACCAGTCTAGCACCTTATGTGAAAGTTTTTGAACATTTTCTTGAAAATCTGGATAAATCCCGAAAAGGAGAACTTCTTAAGAAGAGTGGTAAGACGCTATGCCTTTCCCTTCTATCTAGTTAG
Amino sequence
METFDPTELPELLKLYYRRLFPYSQYYRWLNYGGVIKNYFQHREFSFTLKDDIYIRYQSFNNQSDLEKEMQKMNPYKIDIGAVYSHRPNQHNTVKLGAFQAQEKELVFDIDMTDYDDVRRCCSSADICPKCWTLMTMAIRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSAVRSGIVEYLSLVKGGQDVKKKVHLSEKIHPFIRKSINIIKKYFEEYALVNQDILENKESWDKILALVPETIHDELQQSFQKSHNSLQRWEHLKKVASRYQNNIKNDKYGPWLEWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKTGRISVPIDLQKVDQFDPFTVPTISFICRELDAISTNEEEKEENEAESDVKHRTRDYKKTSLAPYVKVFEHFLENLDKSRKGELLKKSGKTLCLSLLSS*