ENST00000356891.4 RLIG1

Information
Transcript ID
ENST00000356891.4
Genome
hg19
Position
chr12:88,429,313-88,443,937
Strand
+
CDS length
978
Amino acid length
326
Gene symbol
RLIG1
Gene type
protein-coding
Gene description
RNA 5'-phosphate and 3'-OH ligase 1
Gene Entrez Gene ID
91298
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 88,429,313 88,429,515
2 88,433,925 88,434,042
3 88,436,602 88,436,697
4 88,437,376 88,437,492
5 88,439,359 88,439,556
6 88,440,584 88,440,753
7 88,442,011 88,443,937
CDS
Exon number Type Start Stop
1 CDS 88,429,426 88,429,515
2 CDS 88,433,925 88,434,042
3 CDS 88,436,602 88,436,697
4 CDS 88,437,376 88,437,492
5 CDS 88,439,359 88,439,556
6 CDS 88,440,584 88,440,753
7 CDS 88,442,011 88,442,199
Other genome
Genome Chromosome Start End Links
hg38 chr12 88,035,536 88,050,160 Link
CDS sequence
ATGAAGCGCTTGGGCTCCGTGCAGCGGAAAATGCCGTGTGTGTTTGTGACGGAGGTGAAAGAGGAGCCTTCCTCCAAAAGGGAGCATCAGCCATTTAAAGTTTTGGCAACTGAAACTGTAAGTCACAAGGCATTAGATGCAGATATATACAGTGCAATTCCAACAGAAAAAGTGGATGGAACATGTTGTTATGTTACTACCTATAAAGATCAGCCATACCTTTGGGCTCGACTAGATAGAAAACCCAACAAACAAGCTGAAAAAAGATTTAAAAATTTTCTACATTCAAAAGAAAACCCAAAAGAATTTTTTTGGAACGTTGAGGAGGACTTCAAACCAGCTCCGGAGTGCTGGATACCAGCAAAGGAGACAGAACAAATAAATGGGAACCCAGTGCCTGATGAAAATGGACACATTCCTGGTTGGGTACCAGTAGAGAAAAACAACAAACAGTATTGCTGGCATTCCTCTGTAGTTAATTATGAATTTGAAATTGCCCTGGTACTAAAACATCATCCTGATGATTCTGGACTTTTGGAAATTAGTGCAGTGCCACTTTCAGATCTCTTAGAACAAACACTGGAACTCATAGGAACAAATATCAATGGAAACCCATATGGGTTAGGGAGCAAGAAACATCCATTACATCTTCTTATACCACATGGAGCATTTCAAATAAGAAATCTACCTTCATTGAAGCACAATGATCTCGTGTCCTGGTTTGAAGATTGCAAAGAGGGTAAAATTGAAGGAATAGTGTGGCATTGCAGTGATGGCTGTTTAATAAAGGTCCATCGCCATCATCTTGGCTTATGCTGGCCAATTCCAGATACTTACATGAATTCAAGACCAGTTATTATCAACATGAACCTGAACAAATGTGACTCTGCCTTTGATATTAAGTGTTTGTTTAATCATTTTTTAAAAATAGATAATCAGAAATTTGTTAGACTCAAAGATATAATATTTGATGTATAA
Amino sequence
MKRLGSVQRKMPCVFVTEVKEEPSSKREHQPFKVLATETVSHKALDADIYSAIPTEKVDGTCCYVTTYKDQPYLWARLDRKPNKQAEKRFKNFLHSKENPKEFFWNVEEDFKPAPECWIPAKETEQINGNPVPDENGHIPGWVPVEKNNKQYCWHSSVVNYEFEIALVLKHHPDDSGLLEISAVPLSDLLEQTLELIGTNINGNPYGLGSKKHPLHLLIPHGAFQIRNLPSLKHNDLVSWFEDCKEGKIEGIVWHCSDGCLIKVHRHHLGLCWPIPDTYMNSRPVIINMNLNKCDSAFDIKCLFNHFLKIDNQKFVRLKDIIFDV*