ENST00000547098.5 MRPL42
Information
- Transcript ID
- ENST00000547098.5
- Genome
- hg19
- Position
- chr12:93,861,294-93,882,248
- Strand
- +
- CDS length
- 468
- Amino acid length
- 156
- Gene symbol
- MRPL42
- Gene type
- protein-coding
- Gene description
- mitochondrial ribosomal protein L42
- Gene Entrez Gene ID
- 28977
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
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Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
1 | 93,861,294 | 93,861,330 |
2 | 93,862,965 | 93,863,131 |
3 | 93,870,730 | 93,870,793 |
4 | 93,873,164 | 93,873,248 |
5 | 93,881,273 | 93,881,436 |
6 | 93,882,065 | 93,882,248 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
2 | CDS | 93,863,062 | 93,863,131 |
3 | CDS | 93,870,730 | 93,870,793 |
4 | CDS | 93,873,164 | 93,873,248 |
5 | CDS | 93,881,273 | 93,881,436 |
6 | CDS | 93,882,065 | 93,882,149 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg38 | chr12 | 93,467,518 | 93,488,472 | Link |
CDS sequence
ATGGCTGTAGCTGCAGTAAAATGGGTGATGTCAAAGAGAACTATCTTGAAACATTTATTTCCAGTCCAAAATGGAGCTTTATATTGTGTTTGTCATAAATCTACGTATTCTCCTCTACCAGATGACTATAATTGCAACGTAGAGCTTGCTCTGACTTCTGATGGCAGGACAATAGTATGCTACCACCCTTCTGTGGACATTCCATATGAACACACAAAACCTATCCCTCGGCCAGATCCTGTGCATAATAATGAAGAAACACATGATCAAGTGCTGAAAACCAGATTGGAAGAAAAAGTTGAACACCTTGAGGAAGGACCTATGATAGAACAACTTAGCAAAATGTTCTTTACTACTAAGCACCGTTGGTATCCTCATGGACGAGGCAAGGTCTCACTCACTGTGTTGCGCAGGCTGATTTTAAACTCCTGGACTCAAGTGATCCTCCTCCCTCAGCTGGGATTGTAA
Amino sequence
MAVAAVKWVMSKRTILKHLFPVQNGALYCVCHKSTYSPLPDDYNCNVELALTSDGRTIVCYHPSVDIPYEHTKPIPRPDPVHNNEETHDQVLKTRLEEKVEHLEEGPMIEQLSKMFFTTKHRWYPHGRGKVSLTVLRRLILNSWTQVILLPQLGL*