ENST00000545312.1 PLXNC1

Information
Transcript ID
ENST00000545312.1
Genome
hg19
Position
chr12:94,656,297-94,699,374
Strand
+
CDS length
924
Amino acid length
308
Gene symbol
PLXNC1
Gene type
protein-coding
Gene description
plexin C1
Gene Entrez Gene ID
10154
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 94,656,297 94,656,539
2 94,658,855 94,659,001
3 94,673,248 94,673,425
4 94,676,074 94,676,177
5 94,688,262 94,688,316
6 94,690,965 94,690,996
7 94,691,092 94,691,199
8 94,692,408 94,692,571
9 94,694,686 94,694,833
10 94,697,532 94,697,672
11 94,697,753 94,697,827
12 94,698,957 94,699,374
CDS
Exon number Type Start Stop
4 CDS 94,676,082 94,676,177
5 CDS 94,688,262 94,688,316
6 CDS 94,690,965 94,690,996
7 CDS 94,691,092 94,691,199
8 CDS 94,692,408 94,692,571
9 CDS 94,694,686 94,694,833
10 CDS 94,697,532 94,697,672
11 CDS 94,697,753 94,697,827
12 CDS 94,698,957 94,699,061
Other genome
Genome Chromosome Start End Links
hg38 chr12 94,262,521 94,305,598 Link
CDS sequence
ATGGGCACACGACAGAAAGAACTTCTGGACATCGACAGTTCCTCCGTGATTCTTGAAGATGGAATCACCAAGCTAAACACCATTGGCCACTATGAGATATCAAATGGATCCACTATAAAAGTCTTTAAGAAGATAGCAAATTTTACTTCAGATGTGGAGTACTCGGATGACCACTGCCATTTGATTTTACCAGATTCGGAAGCATTCCAAGATGTGCAAGGAAAGAGACATCGAGGGAAGCACAAGTTCAAAGTAAAAGAAATGTATCTGACAAAGCTGCTGTCGACCAAGGTGGCAATTCATTCTGTGCTTGAAAAACTTTTTAGAAGCATTTGGAGTTTACCCAACAGCAGAGCTCCATTTGCTATAAAATACTTTTTTGACTTTTTGGACGCCCAGGCTGAAAACAAAAAAATCACAGATCCTGACGTCGTACATATTTGGAAAACAAACAGCCTTCCTCTTCGCTTCTGGGTAAACATCCTGAAGAACCCTCAGTTTGTCTTTGACATTAAGAAGACACCACATATAGACGGCTGTTTGTCAGTGATTGCCCAGGCATTCATGGATGCATTTTCTCTCACAGAGCAGCAACTAGGGAAGGAAGCACCAACTAATAAGCTTCTCTATGCCAAGGATATCCCAACCTACAAAGAAGAAGTAAAATCTTATTACAAAGCAATCAGGGATTTGCCTCCATTGTCATCCTCAGAAATGGAAGAATTTTTAACTCAGGAATCTAAGAAACATGAAAATGAATTTAATGAAGAAGTGGCCTTGACAGAAATTTACAAATACATCGTAAAATATTTTGATGAGATTCTAAATAAACTAGAAAGAGAACGAGGGCTGGAAGAAGCTCAGAAACAACTCTTGCATGTAAAAGTCTTATTTGATGAAAAGAAGAAATGCAAGTGGATGTAA
Amino sequence
MGTRQKELLDIDSSSVILEDGITKLNTIGHYEISNGSTIKVFKKIANFTSDVEYSDDHCHLILPDSEAFQDVQGKRHRGKHKFKVKEMYLTKLLSTKVAIHSVLEKLFRSIWSLPNSRAPFAIKYFFDFLDAQAENKKITDPDVVHIWKTNSLPLRFWVNILKNPQFVFDIKKTPHIDGCLSVIAQAFMDAFSLTEQQLGKEAPTNKLLYAKDIPTYKEEVKSYYKAIRDLPPLSSSEMEEFLTQESKKHENEFNEEVALTEIYKYIVKYFDEILNKLERERGLEEAQKQLLHVKVLFDEKKKCKWM*