ENST00000552085.1 SNRPF
Information
- Transcript ID
- ENST00000552085.1
- Genome
- hg19
- Position
- chr12:96,252,747-96,297,606
- Strand
- +
- CDS length
- 384
- Amino acid length
- 128
- Gene symbol
- SNRPF
- Gene type
- protein-coding
- Gene description
- small nuclear ribonucleoprotein polypeptide F
- Gene Entrez Gene ID
- 6636
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 96,252,747 | 96,252,854 |
| 2 | 96,254,946 | 96,255,071 |
| 3 | 96,273,466 | 96,273,499 |
| 4 | 96,282,837 | 96,282,959 |
| 5 | 96,297,183 | 96,297,606 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 96,252,852 | 96,252,854 |
| 2 | CDS | 96,254,946 | 96,255,071 |
| 3 | CDS | 96,273,466 | 96,273,499 |
| 4 | CDS | 96,282,837 | 96,282,959 |
| 5 | CDS | 96,297,183 | 96,297,280 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr12 | 95,858,969 | 95,903,828 | Link |
CDS sequence
ATGAGTTTACCCCTCAATCCCAAACCTTTCCTCAATGGACTAACAGGAAAGCCAGTGATGGTGAAACTTAAGTGGGGAATGGAGTACAAGGGCTATCTGGTATCTGTAGATGGCTACATGAACATGCAGATTTTCATCTACATCTTGGGAATATTGAAACAAAATGGAGTTTCACTCTCGTCGCCCAGGCTGGAGTGCAATGGCATGATCTCGGCTCATTGCAACCTCTGTCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGCTAGGACCTCCAGAACACTGACAAAAAGAAGTGGTGCAGTGGAAATCCTTGCCTTGTTCCTAATCTTAGGGGGAAAGCATTCAGTCTTTTACCATTAG
Amino sequence
MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQIFIYILGILKQNGVSLSSPRLECNGMISAHCNLCLPGSSDSPASASRVAGITARTSRTLTKRSGAVEILALFLILGGKHSVFYH*