ENST00000228437.10 PRDM4

Information
Transcript ID
ENST00000228437.10
Genome
hg19
Position
chr12:108,126,648-108,154,914
Strand
-
CDS length
2,406
Amino acid length
802
Gene symbol
PRDM4
Gene type
protein-coding
Gene description
PR/SET domain 4
Gene Entrez Gene ID
11108
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
12 108,126,648 108,128,299
11 108,133,160 108,133,328
10 108,134,723 108,135,037
9 108,135,998 108,136,125
8 108,136,974 108,137,059
7 108,138,320 108,138,438
6 108,140,052 108,140,201
5 108,145,192 108,145,986
4 108,147,701 108,147,886
3 108,150,609 108,150,742
2 108,154,282 108,154,548
1 108,154,734 108,154,914
CDS
Exon number Type Start Stop
12 CDS 108,127,987 108,128,299
11 CDS 108,133,160 108,133,328
10 CDS 108,134,723 108,135,037
9 CDS 108,135,998 108,136,125
8 CDS 108,136,974 108,137,059
7 CDS 108,138,320 108,138,438
6 CDS 108,140,052 108,140,201
5 CDS 108,145,192 108,145,986
4 CDS 108,147,701 108,147,886
3 CDS 108,150,609 108,150,742
2 CDS 108,154,282 108,154,292
Other genome
Genome Chromosome Start End Links
hg38 chr12 107,732,871 107,761,137 Link
CDS sequence
ATGCATCACAGGATGAATGAAATGAACCTGAGTCCAGTGGGGATGGAGCAGCTGACTTCATCCTCTGTGAGCAATGCCTTGCCAGTCTCAGGAAGTCACCTGGGATTGGCTGCCTCACCCACTCACAGTGCCATCCCTGCCCCAGGCCTCCCAGTGGCAATTCCAAACCTGGGTCCCTCCCTGAGCTCTCTGCCTTCTGCTCTGTCTTTAATGCTACCAATGGGTATTGGGGATCGAGGGGTGATGTGTGGGTTACCTGAAAGAAACTACACCCTACCTCCACCACCTTACCCTCACCTGGAGAGCAGTTATTTCAGAACCATTCTACCTGGCATTTTATCTTATTTAGCTGACAGACCACCTCCACAGTACATCCACCCTAACTCTATAAATGTTGATGGTAATACAGCATTATCTATCACCAATAACCCTTCAGCACTAGATCCCTATCAGTCCAATGGAAATGTTGGATTAGAACCAGGCATTGTTTCAATAGACTCTCGCTCTGTGAACACACATGGTGCCCAAAGTCTTCATCCCAGTGATGGCCATGAGGTGGCCTTGGACACAGCAATCACTATGGAGAACGTTTCTAGGGTTACCAGCCCAATTTCGACAGATGGAATGGCAGAGGAGCTTACGATGGACGGTGTTGCAGGCGAGCATTCCCAAATCCCAAATGGCTCCAGAAGTCATGAACCTCTGTCTGTGGATTCTGTGAGCAACAACCTTGCAGCAGACGCTGTAGGACATGGTGGTGTGATACCCATGCATGGGAATGGCCTGGAGCTCCCTGTGGTCATGGAGACAGACCACATTGCAAGTCGGGTCAATGGCATGTCTGACAGTGCCCTCAGTGACTCCATTCACACTGTGGCCATGAGCACCAACTCTGTAAGCGTGGCACTCTCTACCTCACACAACCTTGCCTCCCTAGAATCTGTTTCCCTCCATGAAGTTGGCCTCAGCCTAGAACCTGTGGCTGTCTCCTCCATCACCCAGGAGGTTGCTATGGGGACAGGTCATGTAGATGTATCTTCAGACAGTCTTTCTTTTGTATCACCTTCACTGCAAATGGAAGACTCCAATTCAAACAAGGAGAACATGGCAACCTTGTTTACAATTTGGTGTACTCTGTGTGACCGCGCCTATCCCTCGGACTGTCCCGAACATGGACCAGTGACTTTTGTTCCTGACACTCCAATAGAGAGCAGAGCAAGGCTTTCTCTCCCAAAGCAGCTTGTTCTCCGTCAGTCAATTGTGGGAGCAGAAGTTGGTGTATGGACTGGAGAAACCATTCCTGTGCGGACTTGCTTTGGACCTCTAATTGGCCAGCAGAGTCACTCCATGGAAGTAGCAGAATGGACAGACAAGGCAGTTAACCATATCTGGAAGATATACCACAATGGTGTCCTAGAATTCTGCATCATTACAACTGATGAAAATGAATGTAATTGGATGATGTTTGTGCGCAAAGCCAGGAACCGGGAAGAGCAGAATTTGGTGGCTTATCCTCATGATGGAAAAATCTTTTTCTGCACCTCACAAGATATCCCTCCTGAAAATGAACTGCTTTTTTATTATAGCCGAGATTATGCTCAACAGATTGGTGTTCCTGAACACCCAGATGTGCATCTCTGTAACTGTGGCAAGGAGTGCAATTCTTACACAGAGTTCAAAGCCCATCTGACCAGCCACATCCATAACCATCTTCCTACCCAGGGACATAGCGGCAGCCATGGGCCAAGTCACAGCAAAGAAAGGAAGTGGAAGTGCTCAATGTGCCCCCAAGCTTTTATCTCTCCTTCCAAACTTCATGTCCACTTTATGGGTCACATGGGTATGAAGCCCCACAAGTGTGATTTCTGTAGCAAGGCTTTTAGTGATCCCAGCAACCTGCGGACCCACCTCAAGATACATACAGGTCAGAAGAACTACAGGTGTACCTTGTGTGACAAGTCTTTCACCCAGAAGGCTCACCTGGAGTCCCACATGGTTATCCACACTGGGGAGAAGAATCTTAAGTGTGATTACTGTGACAAGTTGTTTATGCGGAGGCAGGACCTCAAGCAGCACGTGCTCATCCACACTCAAGAACGCCAGATCAAGTGTCCCAAGTGTGATAAGCTGTTCTTGAGAACAAATCACTTAAAGAAGCATCTCAATTCTCATGAAGGAAAACGGGATTATGTCTGTGAAAAATGTACAAAGGCTTATCTAACCAAATACCATCTCACCCGCCACCTGAAAACCTGCAAAGGGCCCACCTCCAGTTCGTCAGCACCAGAGGAGGAAGAAGAGGATGACTCAGAAGAGGAAGATCTAGCAGACTCTGTGGGGACAGAAGACTGTAGGATTAACAGTGCTGTGTATTCAGCGGATGAGTCTCTTTCTGCACATAAATAA
Amino sequence
MHHRMNEMNLSPVGMEQLTSSSVSNALPVSGSHLGLAASPTHSAIPAPGLPVAIPNLGPSLSSLPSALSLMLPMGIGDRGVMCGLPERNYTLPPPPYPHLESSYFRTILPGILSYLADRPPPQYIHPNSINVDGNTALSITNNPSALDPYQSNGNVGLEPGIVSIDSRSVNTHGAQSLHPSDGHEVALDTAITMENVSRVTSPISTDGMAEELTMDGVAGEHSQIPNGSRSHEPLSVDSVSNNLAADAVGHGGVIPMHGNGLELPVVMETDHIASRVNGMSDSALSDSIHTVAMSTNSVSVALSTSHNLASLESVSLHEVGLSLEPVAVSSITQEVAMGTGHVDVSSDSLSFVSPSLQMEDSNSNKENMATLFTIWCTLCDRAYPSDCPEHGPVTFVPDTPIESRARLSLPKQLVLRQSIVGAEVGVWTGETIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHIWKIYHNGVLEFCIITTDENECNWMMFVRKARNREEQNLVAYPHDGKIFFCTSQDIPPENELLFYYSRDYAQQIGVPEHPDVHLCNCGKECNSYTEFKAHLTSHIHNHLPTQGHSGSHGPSHSKERKWKCSMCPQAFISPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLCDKSFTQKAHLESHMVIHTGEKNLKCDYCDKLFMRRQDLKQHVLIHTQERQIKCPKCDKLFLRTNHLKKHLNSHEGKRDYVCEKCTKAYLTKYHLTRHLKTCKGPTSSSSAPEEEEEDDSEEEDLADSVGTEDCRINSAVYSADESLSAHK*