ENST00000610966.5 SVOP

Information
Transcript ID
ENST00000610966.5
Genome
hg19
Position
chr12:109,301,517-109,458,873
Strand
-
CDS length
1,486
Amino acid length
495.333
Gene symbol
SVOP
Gene type
protein-coding
Gene description
SV2 related protein
Gene Entrez Gene ID
55530
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
15 109,301,517 109,306,517
14 109,309,559 109,309,648
13 109,311,819 109,311,900
12 109,313,451 109,313,562
11 109,316,466 109,316,573
10 109,327,971 109,328,047
9 109,331,040 109,331,113
8 109,332,603 109,332,731
7 109,334,560 109,334,685
6 109,338,879 109,338,942
5 109,354,699 109,354,823
4 109,366,181 109,366,252
3 109,371,174 109,371,272
2 109,372,354 109,372,439
1 109,458,639 109,458,873
CDS
Exon number Type Start Stop
15 CDS 109,306,311 109,306,517
14 CDS 109,309,559 109,309,648
13 CDS 109,311,819 109,311,900
12 CDS 109,313,451 109,313,562
11 CDS 109,316,466 109,316,573
10 CDS 109,327,971 109,328,047
9 CDS 109,331,040 109,331,113
8 CDS 109,332,603 109,332,731
7 CDS 109,334,560 109,334,685
6 CDS 109,338,879 109,338,942
5 CDS 109,354,699 109,354,823
4 CDS 109,366,181 109,366,252
3 CDS 109,371,174 109,371,272
2 CDS 109,372,354 109,372,439
1 CDS 109,458,639 109,458,673
Other genome
Genome Chromosome Start End Links
hg38 chr12 108,907,741 109,021,068 Link
CDS sequence
ATGGAGGAGGACTTATTCCAGCTAAGGCAGCTGCCATACTTTCATGGTGGAAGATGCAGTGGAAGCCATTGGCTTTGGAAAATTTCAGTGGAAGCTGTCTGTTCTCACTGGCTTGGCTTGGATGGCTGATGCCATGGAGATGATGATCCTCAGCATCCTGGCACCACAGCTGCATTGCGAGTGGAGGCTCCCAAGCTGGCAGGTGGCATTGCTGACCTCGGTGGTCTTTGTAGGCATGATGTCCAGCTCCACGCTCTGGGGAAATATCTCAGACCAGTACGGCAGGAAAACAGGGCTGAAGATCAGCGTGCTGTGGACTCTGTACTATGGCATCCTTAGTGCATTTGCGCCCGTGTATAGCTGGATCCTGGTGCTCCGGGGCCTGGTGGGCTTCGGGATCGGAGGAGTTCCCCAGTCGGTGACGCTGTATGCCGAGTTCCTTCCCATGAAAGCCAGAGCTAAATGTATTTTGCTGATTGAGGTATTCTGGGCCATCGGGACAGTGTTCGAGGTCGTCCTGGCTGTGTTCGTGATGCCCAGCCTGGGCTGGCGTTGGCTGCTCATCCTCTCAGCTGTCCCGCTCCTCCTCTTTGCCGTGCTGTGTTTCTGGCTGCCTGAAAGTGCAAGGTATGATGTGCTGTCAGGGAACCAGGAAAAGGCAATCGCCACCTTAAAGAGGATAGCAACTGAAAACGGAGCTCCCATGCCGCTGGGGAAACTCATCATCTCCAGACAGGAAGACCGAGGCAAAATGAGGGACCTTTTCACACCCCATTTTAGATGGACAACTTTGCTGCTGTGGTTTATATGGTTTTCCAATGCATTCTCTTACTACGGGTTAGTTCTACTCACCACAGAACTCTTCCAGGCAGGAGATGTCTGCGGCATCTCCAGTCGGAAGAAGGCTGTAGAGGCAAAATGCAGCCTGGCCTGCGAGTACCTGAGTGAGGAGGATTACATGGACTTGCTGTGGACCACCCTCTCTGAGTTTCCAGGTGTCCTTGTGACTCTGTGGATTATTGACCGCCTGGGGCGCAAGAAGACCATGGCCCTGTGCTTTGTCATCTTCTCCTTCTGCAGCCTCCTGCTGTTTATCTGTGTTGGAAGAAATGTGCTCACTCTGTTACTCTTCATTGCAAGAGCGTTTATTTCTGGAGGCTTTCAAGCGGCATATGTTTACACACCTGAGGTCTACCCCACGGCAACGCGGGCCCTCGGCCTGGGCACCTGCAGCGGCATGGCAAGAGTGGGTGCTCTCATCACTCCGTTCATCGCCCAGGTGATGCTGGAATCCTCTGTGTACCTGACTCTGGCAGTTTACAGTGGCTGCTGCCTCCTGGCTGCCCTGGCCTCCTGCTTTTTGCCCATTGAGACCAAAGGCCGAGGACTGCAGGAGTCCAGCCACCGGGAGTGGGGCCAGGAGATGGTCGGCCGAGGAATGCACGGTGCAGGTGTTACCAGGTCGAACTCTGGCTCTCAGGAATAG
Amino sequence
MEEDLFQLRQLPYFHGGRCSGSHWLWKISVEAVCSHWLGLDG*CHGDDDPQHPGTTAALRVEAPKLAGGIADLGGLCRHDVQLHALGKYLRPVRQENRAEDQRAVDSVLWHP*CICARV*LDPGAPGPGGLRDRRSSPVGDAVCRVPSHESQS*MYFAD*GILGHRDSVRGRPGCVRDAQPGLALAAHPLSCPAPPLCRAVFLAA*KCKV*CAVREPGKGNRHLKEDSN*KRSSHAAGETHHLQTGRPRQNEGPFHTPF*MDNFAAVVYMVFQCILLLRVSSTHHRTLPGRRCLRHLQSEEGCRGKMQPGLRVPE*GGLHGLAVDHPL*VSRCPCDSVDY*PPGAQEDHGPVLCHLLLLQPPAVYLCWKKCAHSVTLHCKSVYFWRLSSGICLHT*GLPHGNAGPRPGHLQRHGKSGCSHHSVHRPGDAGILCVPDSGSLQWLLPPGCPGLLLFAH*DQRPRTAGVQPPGVGPGDGRPRNARCRCYQVELWLSGI