ENST00000543199.5 GPN3
Information
- Transcript ID
- ENST00000543199.5
- Genome
- hg19
- Position
- chr12:110,890,292-110,906,526
- Strand
- -
- CDS length
- 972
- Amino acid length
- 324
- Gene symbol
- GPN3
- Gene type
- protein-coding
- Gene description
- GPN-loop GTPase 3
- Gene Entrez Gene ID
- 51184
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 8 | 110,890,292 | 110,890,901 |
| 7 | 110,891,548 | 110,891,676 |
| 6 | 110,893,391 | 110,893,487 |
| 5 | 110,893,620 | 110,893,735 |
| 4 | 110,895,315 | 110,895,439 |
| 3 | 110,897,500 | 110,897,667 |
| 2 | 110,902,911 | 110,903,019 |
| 1 | 110,906,277 | 110,906,526 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 8 | CDS | 110,890,839 | 110,890,901 |
| 7 | CDS | 110,891,548 | 110,891,676 |
| 6 | CDS | 110,893,391 | 110,893,487 |
| 5 | CDS | 110,893,620 | 110,893,735 |
| 4 | CDS | 110,895,315 | 110,895,439 |
| 3 | CDS | 110,897,500 | 110,897,667 |
| 2 | CDS | 110,902,911 | 110,903,019 |
| 1 | CDS | 110,906,277 | 110,906,441 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr12 | 110,452,487 | 110,468,721 | Link |
CDS sequence
ATGCTCCCCAAAACAAGAGGTGCCTTCCACTTCAGTATTCCAGATCCTCAGCACATTTGCAAATCGCGAGGGTCACCATACAGGTCAAACGTCTGCACGCAAACCACGGACCGAAGCACGTGGCGCAAGGATGCGGAGCTTTATCTGTTGTCCGTTATTACTCAGAGCACCTACTGTGCCACCATGGTCCAGCACTGTGAAGCCCTCAACCGGTCTGTCCAAGTTGTAAACCTGGATCCAGCAGCAGAACACTTCAACTACTCCGTGATGGCTGACATCCGGGAACTGATCGAGGTGGATGATGTAATGGAGGATGATTCTCTGCGATTCGGTCCCAACGGAGGATTGGTATTTTGCATGGAGTACTTTGCCAATAATTTTGACTGGCTGGAGAACTGTCTTGGCCATGTAGAGGACGACTATATCCTTTTTGATTGTCCAGGTCAGATTGAGTTGTACACTCACCTGCCTGTGATGAAACAGCTGGTCCAGCAGCTCGAGCAGTGGGAGTTCCGAGTCTGTGGAGTTTTTCTTGTTGATTCTCAGTTCATGGTGGAGTCATTCAAGTTTATTTCTGGCATCTTGGCAGCCCTGAGTGCCATGATCTCTCTAGAAATTCCGCAAGTCAACATCATGACAAAAATGGATCTGCTGAGTAAAAAAGCAAAAAAGGAAATTGAGAAATTTTTAGATCCAGACATGTATTCTTTATTAGAAGATTCTACAAGTGACTTAAGAAGCAAAAAATTCAAGAAACTGACTAAAGCTATATGTGGACTGATTGATGACTACAGCATGGTTCGATTTTTACCTTACGATCAGTCAGATGAAGAAAGCATGAACATTGTATTGCAGCATATTGATTTTGCCATTCAATATGGAGAAGACCTAGAATTTAAAGAACCAAAGGAACGTGAAGATGAGTCTTCCTCTATGTTTGACGAATATTTTCAAGAATGCCAGGATGAATGA
Amino sequence
MLPKTRGAFHFSIPDPQHICKSRGSPYRSNVCTQTTDRSTWRKDAELYLLSVITQSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDVMEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQLVQQLEQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLLSKKAKKEIEKFLDPDMYSLLEDSTSDLRSKKFKKLTKAICGLIDDYSMVRFLPYDQSDEESMNIVLQHIDFAIQYGEDLEFKEPKEREDESSSMFDEYFQECQDE*