ENST00000556529.4 MAP1LC3B2

Information
Transcript ID
ENST00000556529.4
Genome
hg19
Position
chr12:116,997,186-117,014,411
Strand
+
CDS length
378
Amino acid length
126
Gene symbol
MAP1LC3B2
Gene type
protein-coding
Gene description
microtubule associated protein 1 light chain 3 beta 2
Gene Entrez Gene ID
643246
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 116,997,186 116,997,238
2 117,013,647 117,014,411
CDS
Exon number Type Start Stop
2 CDS 117,013,748 117,014,125
Other genome
Genome Chromosome Start End Links
hg38 chr12 116,559,381 116,576,606 Link
CDS sequence
ATGCCGTCGGAGAAGACCTTCAAGCAGCGGCGCACCTTCGAACAAAGAGTAGAAGATGTCCGACTTATTCGAGAGCAGCATCCAACCAAAATCCCGGTGATAATAGAACGATACAAGGGTGAGAAGCAGCTTCCTGTTCTGGATAAAACAAAGTTCCTTGTACCTGACCATGTCAACATGAGTGAGCTCATCAAGATAATTAGAAGGCGCTTACAGCTCAATGCTAATCAGGCCTTCTTCCTGTTGGTGAACGGACACAGCATGGTCAGCGTCTCCACACCAATCTCAGAGGTGTATGAGAGTGAGAAAGATGAAGATGGATTCCTGTACATGGTCTGTGCCTCCCAGGAGACGTTCGGGATGAAATTGTCAGTGTAA
Amino sequence
MPSEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVCASQETFGMKLSV*