ENST00000539736.5 C12orf43
Information
- Transcript ID
- ENST00000539736.5
- Genome
- hg19
- Position
- chr12:121,441,695-121,454,290
- Strand
- -
- CDS length
- 759
- Amino acid length
- 253
- Gene symbol
- C12orf43
- Gene type
- protein-coding
- Gene description
- chromosome 12 open reading frame 43
- Gene Entrez Gene ID
- 64897
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 6 | 121,441,695 | 121,442,295 |
| 5 | 121,442,806 | 121,442,863 |
| 4 | 121,444,124 | 121,444,197 |
| 3 | 121,448,631 | 121,448,729 |
| 2 | 121,448,907 | 121,448,949 |
| 1 | 121,454,133 | 121,454,290 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 6 | CDS | 121,441,956 | 121,442,295 |
| 5 | CDS | 121,442,806 | 121,442,863 |
| 4 | CDS | 121,444,124 | 121,444,197 |
| 3 | CDS | 121,448,631 | 121,448,729 |
| 2 | CDS | 121,448,907 | 121,448,949 |
| 1 | CDS | 121,454,133 | 121,454,277 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr12 | 121,003,892 | 121,016,487 | Link |
CDS sequence
ATGGCGGCGCCCAGTGGCACAGTGAGCGATTCGGAAAGTAGTAACAGCAGTAGCGATGCGGAGGAGCTGGAGCGGTGCCGCGAGGCGGCAATGCCGGCTTGGGGCTTGGAGCAACGCCCGCACGTGGCAGGGAAGCCAAGAGCCGGTGCTGCAAATAGCCAGTTGTCAACCTCCCAACCGAGCCTCAGGCATAAGGTGAATGAGCATGAACAAGATGGCAACGAGCTTCAGACCACCCCTGAATTCCGAGCCCACGTAGCCAAGAAGCTGGGAGCCCTGCTGGACAGCTTCATTACCATCTCAGAAGCAGCAAAGGAGCCAGCAAAAGCTAAGGTACAGAAAGTCGCTTTGGAGGATGATGGCCGTGAGAAGGAAGAGTCTCCCCAACCCCGCCGAAAGCGACAGCCCTCCAGCTCCAGCAGTGAGGACAGTGACGAGGAGTGGCGGCGGTGCCGGGAGGCAGCTGTGTCGGCGTCCGACATCCTACAGGAGTCAGCCATCCACAGCCCTGGAACAGTGGAGAAGGAGGCAAAGAAGAAAAGGAAGTTGAAAAAGAAAGCCAAGAAGGTGGCCAGTGTCGACTCGGCTGTCGCTGCCACCACCCCCACCAGCATGGCCACAGTCCAGAAGCAGAAGTCAGGTGAGCTCAACGGGGACCAGGTGTCGCTTGGGACCAAAAAGAAGAAAAAGGCAAAGAAGGCCAGCGAGACCTCTCCATTCCCACCAGCAAAGAGTGCTACAGCTATACCTGCAAACTGA
Amino sequence
MAAPSGTVSDSESSNSSSDAEELERCREAAMPAWGLEQRPHVAGKPRAGAANSQLSTSQPSLRHKVNEHEQDGNELQTTPEFRAHVAKKLGALLDSFITISEAAKEPAKAKVQKVALEDDGREKEESPQPRRKRQPSSSSSEDSDEEWRRCREAAVSASDILQESAIHSPGTVEKEAKKKRKLKKKAKKVASVDSAVAATTPTSMATVQKQKSGELNGDQVSLGTKKKKKAKKASETSPFPPAKSATAIPAN*