ENST00000302528.11 CLIP1
Information
- Transcript ID
- ENST00000302528.11
- Genome
- hg19
- Position
- chr12:122,755,981-122,865,107
- Strand
- -
- CDS length
- 4,284
- Amino acid length
- 1,428
- Gene symbol
- CLIP1
- Gene type
- protein-coding
- Gene description
- CAP-Gly domain containing linker protein 1
- Gene Entrez Gene ID
- 6249
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 24 | 122,755,981 | 122,757,647 |
| 23 | 122,758,585 | 122,758,709 |
| 22 | 122,762,701 | 122,762,750 |
| 21 | 122,763,339 | 122,763,489 |
| 20 | 122,763,575 | 122,763,692 |
| 19 | 122,773,036 | 122,773,088 |
| 18 | 122,794,309 | 122,794,429 |
| 17 | 122,801,296 | 122,801,402 |
| 16 | 122,803,779 | 122,803,895 |
| 15 | 122,812,494 | 122,812,709 |
| 14 | 122,812,808 | 122,812,973 |
| 13 | 122,817,534 | 122,817,690 |
| 12 | 122,818,574 | 122,818,657 |
| 11 | 122,819,195 | 122,819,252 |
| 10 | 122,821,179 | 122,821,295 |
| 9 | 122,825,300 | 122,826,244 |
| 8 | 122,831,922 | 122,832,026 |
| 7 | 122,837,273 | 122,837,333 |
| 6 | 122,839,000 | 122,839,103 |
| 5 | 122,839,662 | 122,839,859 |
| 4 | 122,845,506 | 122,845,728 |
| 3 | 122,848,530 | 122,848,654 |
| 2 | 122,861,936 | 122,862,507 |
| 1 | 122,864,915 | 122,865,107 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 24 | CDS | 122,757,422 | 122,757,647 |
| 23 | CDS | 122,758,585 | 122,758,709 |
| 22 | CDS | 122,762,701 | 122,762,750 |
| 21 | CDS | 122,763,339 | 122,763,489 |
| 20 | CDS | 122,763,575 | 122,763,692 |
| 19 | CDS | 122,773,036 | 122,773,088 |
| 18 | CDS | 122,794,309 | 122,794,429 |
| 17 | CDS | 122,801,296 | 122,801,402 |
| 16 | CDS | 122,803,779 | 122,803,895 |
| 15 | CDS | 122,812,494 | 122,812,709 |
| 14 | CDS | 122,812,808 | 122,812,973 |
| 13 | CDS | 122,817,534 | 122,817,690 |
| 12 | CDS | 122,818,574 | 122,818,657 |
| 11 | CDS | 122,819,195 | 122,819,252 |
| 10 | CDS | 122,821,179 | 122,821,295 |
| 9 | CDS | 122,825,300 | 122,826,244 |
| 8 | CDS | 122,831,922 | 122,832,026 |
| 7 | CDS | 122,837,273 | 122,837,333 |
| 6 | CDS | 122,839,000 | 122,839,103 |
| 5 | CDS | 122,839,662 | 122,839,859 |
| 4 | CDS | 122,845,506 | 122,845,728 |
| 3 | CDS | 122,848,530 | 122,848,654 |
| 2 | CDS | 122,861,936 | 122,862,507 |
| 1 | CDS | 122,864,915 | 122,864,999 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr12 | 122,271,434 | 122,380,560 | Link |
CDS sequence
ATGAGTATGCTAAAGCCAAGTGGGCTTAAGGCCCCCACCAAGATCCTGAAGCCTGGAAGCACAGCTCTGAAGACACCTACGGCTGTTGTAGCTCCAGTAGAAAAAACCATATCCAGTGAAAAAGCATCAAGCACTCCATCATCTGAGACTCAGGAGGAATTTGTGGATGACTTTCGAGTTGGGGAGCGAGTTTGGGTGAATGGAAATAAGCCTGGATTTATCCAGTTTCTTGGAGAAACCCAGTTTGCACCAGGCCAGTGGGCTGGAATTGTTTTAGATGAACCCATAGGCAAGAACGATGGTTCGGTGGCAGGAGTTCGGTATTTCCAGTGTGAACCTTTAAAGGGCATATTTACCCGACCTTCAAAGTTAACAAGGAAGGTGCAAGCAGAAGATGAAGCTAATGGCCTGCAGACAACGCCCGCCTCCCGAGCTACTTCACCGCTGTGCACTTCTACGGCCAGCATGGTGTCTTCCTCCCCCTCCACCCCTTCAAACATCCCTCAGAAACCATCACAGCCAGCAGCAAAGGAACCTTCAGCTACGCCTCCGATCAGCAACCTTACAAAAACTGCCAGTGAATCTATCTCCAACCTTTCAGAGGCTGGCTCAATCAAGAAAGGAGAAAGAGAGCTCAAAATCGGAGACAGAGTATTGGTTGGTGGCACTAAGGCTGGTGTAGTCCGGTTTCTTGGGGAGACCGACTTTGCCAAGGGGGAGTGGTGTGGCGTGGAGTTAGATGAGCCACTTGGGAAGAATGATGGCGCTGTTGCTGGAACAAGGTATTTTCAGTGTCAACCCAAATATGGCTTGTTCGCTCCTGTCCACAAAGTTACCAAGATTGGCTTCCCTTCCACTACACCAGCCAAAGCCAAGGCCAACGCAGTGAGGCGAGTGATGGCGACCACGTCCGCCAGCCTGAAGCGCAGCCCTTCTGCCTCTTCCCTCAGCTCCATGAGCTCAGTGGCCTCCTCTGTGAGCAGCAGGCCCAGTCGGACAGGACTATTGACTGAAACCTCCTCCCGTTACGCCAGGAAGATCTCCGGTACCACTGCCCTCCAGGAGGCCCTGAAGGAGAAGCAGCAGCACATTGAGCAGCTGCTGGCGGAACGGGATCTGGAGAGGGCGGAGGTGGCCAAGGCCACGAGCCACGTGGGGGAGATAGAGCAGGAGCTAGCTCTGGCCCGGGACGGACATGACCAGCATGTCCTGGAATTGGAAGCCAAAATGGACCAGCTGCGAACAATGGTGGAAGCTGCTGACAGGGAGAAGGTGGAGCTTCTCAACCAGCTTGAAGAGGAGAAAAGGAAGGTTGAGGACCTTCAGTTCCGGGTTGAAGAAGAATCAATTACCAAAGGTGATCTTGAGACGCAGACCAAACTGGAGCATGCCCGCATTAAGGAGCTTGAACAGAGCCTGCTCTTTGAAAAGACCAAAGCTGACAAACTCCAGAGGGAGTTAGAAGACACTAGGGTGGCTACAGTTTCAGAAAAGTCACGTATAATGGAACTGGAGAAAGACCTAGCATTGAGAGTACAGGAAGTAGCTGAGCTCCGAAGAAGGCTAGAGTCCAATAAGCCTGCTGGGGATGTGGACATGTCACTTTCCCTTTTGCAAGAGATAAGCTCTTTGCAAGAAAAGTTAGAAGTCACCCGTACTGACCACCAGAGAGAAATAACTTCTCTGAAGGAGCATTTTGGAGCCCGGGAAGAAACTCATCAGAAGGAGATAAAGGCTCTGTATACCGCCACGGAAAAGCTTTCCAAAGAGAACGAGTCATTGAAAAGCAAGCTGGAGCATGCCAACAAAGAGAACTCAGATGTGATAGCTCTATGGAAGTCCAAACTGGAGACTGCCATCGCATCCCACCAGCAGGCGATGGAAGAACTGAAGGTATCTTTCAGCAAAGGGCTTGGAACAGAGACGGCAGAATTTGCTGAACTAAAAACACAAATAGAGAAAATGAGACTAGATTACCAACACGAAATAGAAAATTTGCAGAATCAACAAGACTCTGAACGGGCTGCCCATGCTAAAGAGATGGAAGCCTTGAGGGCTAAACTGATGAAAGTTATTAAAGAAAAGGAAAACAGTCTGGAAGCCATCAGGTCGAAACTGGACAAAGCAGAAGACCAGCATCTCGTAGAAATGGAAGACACGTTAAACAAATTACAGGAAGCTGAAATAAAGGTAAAGGAGCTAGAGGTACTGCAAGCCAAATGCAATGAACAAACCAAGGTTATTGATAATTTTACATCACAGCTCAAGGCTACTGAAGAAAAGCTCTTGGATCTTGATGCACTTCGGAAAGCCAGTTCCGAAGGTAAATCGGAAATGAAGAAACTTAGACAGCAGCTTGAGGCAGCTGAGAAACAGATTAAACATTTAGAGATTGAAAAGAATGCTGAAAGTAGCAAGGCTAGTAGCATTACCAGAGAGCTCCAGGGGAGAGAGCTAAAGCTTACTAACCTTCAGGAAAATTTGAGTGAAGTCAGTCAAGTGAAAGAGACTTTGGAAAAAGAACTTCAGATTTTGAAAGAAAAGTTTGCTGAAGCTTCAGAGGAGGCAGTCTCTGTTCAGAGAAGTATGCAAGAAACTGTAAATAAGTTACACCAAAAGGAGGAACAGTTTAACATGCTGTCTTCTGACTTGGAGAAGCTGAGAGAAAACTTAGCAGATATGGAGGCAAAATTTAGAGAGAAAGATGAGAGAGAAGAGCAGCTGATAAAGGCAAAGGAAAAACTGGAAAATGACATTGCAGAAATAATGAAGATGTCAGGAGATAACTCTTCTCAGCTGACAAAAATGAACGATGAATTACGTCTGAAAGAAAGAGATGTAGAAGAATTACAGCTAAAACTTACAAAGGCTAATGAAAATGCAAGTTTTCTGCAAAAAAGTATTGAGGACATGACTGTCAAAGCTGAACAGAGCCAGCAAGAAGCAGCTAAAAAGCATGAGGAAGAAAAGAAAGAATTGGAGAGGAAATTGTCGGACCTGGAAAAGAAAATGGAAACAAGCCACAACCAGTGTCAGGAGCTGAAAGCCAGGTATGAGAGAGCCACTTCTGAGACAAAAACCAAGCATGAAGAAATCCTACAGAACCTCCAGAAGACGCTGCTGGACACAGAGGACAAGCTGAAGGGCGCACGGGAGGAGAACAGTGGCTTGCTGCAGGAGCTGGAGGAGCTGAGAAAGCAAGCCGACAAAGCCAAAGCTGCTCAAACAGCGGAAGATGCCATGCAGATAATGGAACAGATGACCAAAGAGAAGACTGAGACTCTGGCCTCCTTGGAGGACACCAAGCAAACAAATGCAAAACTACAGAATGAATTGGACACACTTAAAGAAAACAACTTGAAAAATGTGGAAGAGCTGAACAAATCAAAAGAACTCCTGACTGTAGAGAATCAAAAAATGGAAGAATTTAGGAAAGAAATAGAAACCCTAAAGCAGGCAGCAGCTCAGAAGTCCCAGCAGCTTTCAGCGTTGCAAGAAGAGAACGTTAAACTTGCTGAGGAGCTGGGGAGAAGCAGGGACGAAGTCACAAGTCATCAAAAGCTGGAAGAAGAAAGATCTGTGCTCAATAATCAGTTGTTAGAAATGAAAAAAAGAGAATCCAAGTTCATAAAAGACGCAGATGAAGAGAAAGCTTCCTTGCAGAAATCCATCAGTATAACTAGTGCCTTACTCACAGAAAAGGATGCCGAGCTGGAGAAACTGAGAAATGAGGTCACAGTGCTCAGGGGAGAAAACGCCTCTGCCAAGTCCTTGCATTCAGTTGTTCAGACTCTAGAGTCTGATAAGGTGAAGCTCGAGCTCAAGGTAAAGAACTTGGAGCTTCAACTCAAAGAAAACAAGAGGCAGCTCAGCAGCTCCTCAGGTAATACAGACACTCAGGCAGACGAGGATGAAAGAGCCCAGGAGAGTCAGATTGATTTCCTAAATTCAGTAATAGTGGACCTTCAAAGGAAGAATCAAGACCTCAAGATGAAGGTGGAGATGATGTCAGAAGCAGCCCTGAATGGGAACGGGGATGACCTAAACAATTATGACAGTGATGATCAGGAGAAACAGTCCAAGAAGAAACCTCGCCTCTTCTGTGACATTTGTGACTGCTTTGATCTCCACGACACAGAGGATTGTCCTACCCAGGCACAGATGTCAGAGGACCCTCCCCATTCCACACACCATGGCAGTCGGGGTGAGGAACGCCCATACTGTGAAATCTGTGAGATGTTTGGACACTGGGCCACCAACTGCAATGACGACGAAACCTTCTGA
Amino sequence
MSMLKPSGLKAPTKILKPGSTALKTPTAVVAPVEKTISSEKASSTPSSETQEEFVDDFRVGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIFTRPSKLTRKVQAEDEANGLQTTPASRATSPLCTSTASMVSSSPSTPSNIPQKPSQPAAKEPSATPPISNLTKTASESISNLSEAGSIKKGERELKIGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTTPAKAKANAVRRVMATTSASLKRSPSASSLSSMSSVASSVSSRPSRTGLLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEKDLALRVQEVAELRRRLESNKPAGDVDMSLSLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALYTATEKLSKENESLKSKLEHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMRLDYQHEIENLQNQQDSERAAHAKEMEALRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQADEDERAQESQIDFLNSVIVDLQRKNQDLKMKVEMMSEAALNGNGDDLNNYDSDDQEKQSKKKPRLFCDICDCFDLHDTEDCPTQAQMSEDPPHSTHHGSRGEERPYCEICEMFGHWATNCNDDETF*