ENST00000543589.5 PXMP2
Information
- Transcript ID
- ENST00000543589.5
- Genome
- hg19
- Position
- chr12:133,264,228-133,281,571
- Strand
- +
- CDS length
- 483
- Amino acid length
- 161
- Gene symbol
- PXMP2
- Gene type
- protein-coding
- Gene description
- peroxisomal membrane protein 2
- Gene Entrez Gene ID
- 5827
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 133,264,228 | 133,264,378 |
| 2 | 133,266,849 | 133,266,962 |
| 3 | 133,281,205 | 133,281,571 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 133,264,257 | 133,264,378 |
| 2 | CDS | 133,266,849 | 133,266,962 |
| 3 | CDS | 133,281,205 | 133,281,451 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr12 | 132,687,642 | 132,704,985 | Link |
CDS sequence
ATGGCGCCGGCCGCGTCCAGGCTGCGGGCCGAAGCCGGGCTCGGGGCGCTGCCGCGGCGGGCGCTCGCCCAGTACCTGCTCTTCCTGCGGCTCTACCCGGTGCTCACCAAGGCGGCCACCAGTGGCATTTTGTCAGCACTTGGGAACTTCCTGGCCCAGATGATTGAGAAGAAGCGGAAAAAAGAAAACTCTAGAAGTCTGGATGTCGGTGGGCCTCTGAGATATGCCGTTTACGGTTCCGGGTGCTCTTCGCCAACCTGGCAGCTCTGTTCTGGTATGCCTACCTGGCCTCCTTGGGGAAGTGACGACCGCTGGGAGAACATCAGGTGCACTGTGGACGTGGGTCTGGGGGTCTCACCCGCCCAGCGAGAGCAGAACCAATCCAGTCAGGATGTCACTGACTCTAAATCAGGTGATTCAAGATGCCCAAAAATGATGGATAGAGAAACAGAAATCTCTGAATGTCAGAACCCTGTCTTTTAA
Amino sequence
MAPAASRLRAEAGLGALPRRALAQYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPLRYAVYGSGCSSPTWQLCSGMPTWPPWGSDDRWENIRCTVDVGLGVSPAQREQNQSSQDVTDSKSGDSRCPKMMDRETEISECQNPVF*