ENST00000381588.9 RNF6
Information
- Transcript ID
- ENST00000381588.9
- Genome
- hg19
- Position
- chr13:26,786,912-26,796,451
- Strand
- -
- CDS length
- 2,058
- Amino acid length
- 686
- Gene symbol
- RNF6
- Gene type
- protein-coding
- Gene description
- ring finger protein 6
- Gene Entrez Gene ID
- 6049
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 5 | 26,786,912 | 26,789,729 |
| 4 | 26,792,648 | 26,792,743 |
| 3 | 26,793,594 | 26,793,804 |
| 2 | 26,795,385 | 26,795,467 |
| 1 | 26,796,140 | 26,796,451 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 26,787,961 | 26,789,729 |
| 4 | CDS | 26,792,648 | 26,792,743 |
| 3 | CDS | 26,793,594 | 26,793,786 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr13 | 26,212,775 | 26,222,314 | Link |
CDS sequence
ATGAATCAGTCTAGATCGAGATCAGATGGTGGCAGTGAAGAAACCTTACCTCAAGACCATAATCATCATGAAAATGAGAGAAGATGGCAGCAAGAGCGTCTCCACAGAGAAGAGGCCTATTATCAGTTTATTAATGAACTCAATGATGAAGATTATCGGCTTATGAGAGACCATAATCTTTTAGGCACCCCTGGAGAAATAACATCAGAAGAACTGCAACAGCGGTTAGATGGCGTCAAGGAACAACTAGCATCTCAGCCTGACTTGAGAGATGGAACGAATTACAGAGACTCAGAAGTCCCTAGAGAAAGTTCACATGAAGATTCTCTTCTAGAATGGTTGAACACCTTTCGGCGCACAGGAAATGCAACTCGAAGTGGACAAAATGGGAACCAAACTTGGAGAGCTGTGAGTCGAACAAACCCGAACAATGGAGAGTTTCGGTTTAGTTTGGAAATCCACGTAAATCATGAAAATAGAGGATTTGAAATTCATGGAGAAGATTATACAGACATTCCACTTTCAGATAGTAACAGAGATCATACTGCAAATAGGCAACAAAGGTCAACTAGTCCTGTGGCTAGGCGAACAAGAAGCCAAACCTCAGTGAATTTCAATGGTAGTAGTTCCAACATTCCAAGGACTAGGCTTGCTTCAAGGGGGCAAAATCCAGCTGAAGGATCTTTCTCAACATTGGGAAGGTTAAGAAATGGAATTGGGGGAGCAGCTGGCATTCCTCGAGCTAACGCTTCACGCACTAATTTCAGTAGTCACACAAACCAATCAGGTGGTAGTGAACTCAGGCAAAGGGAGGGGCAACGGTTTGGAGCAGCACATGTTTGGGAAAATGGGGCTAGAAGTAATGTTACAGTGAGGAATACAAACCAAAGATTAGAGCCAATAAGATTACGATCTACTTCCAATAGTCGAAGCCGTTCACCAATTCAGAGACAGAGTGGCACTGTTTATCATAATTCCCAAAGGGAAAGTAGACCAGTACAGCAAACCACTAGAAGATCTGTTAGGAGGAGAGGTAGAACTCGAGTCTTTTTAGAGCAAGATAGAGAACGAGAACGCAGAGGTACTGCATATACCCCATTCTCTAATTCAAGGCTTGTGTCAAGAATAACAGTAGAAGAAGGAGAAGAATCCAGCAGATCCTCAACTGCTGTACGACGACATCCAACAATCACACTGGACCTTCAAGTGAGAAGGATCCGTCCTGGAGAAAATAGAGATCGGGATAGTATTGCAAATAGAACTCGATCCAGAGTAGGGCTAGCAGAAAATACAGTCACTATTGAAAGCAATAGTGGGGGCTTTCGCCGAACCATTTCTCGTTTAGAGCGGTCAGGTATTCGAACCTATGTTAGTACCATAACAGTTCCTCTTCGTAGGATTTCTGAGAATGAGCTTGTTGAGCCATCATCAGTGGCTCTTCGGTCAATTTTAAGGCAGATCATGACTGGGTTTGGAGAACTGAGTTCTCTAATGGAGGCCGATTCTGAGTCAGAACTTCAAAGAAATGGCCAGCATTTACCAGACATGCACTCAGAACTGAGTAACTTAGGTACAGATAACAACAGGAGCCAGCACAGGGAAGGTTCCTCTCAAGACAGGCAGGCCCAAGGAGACAGCACTGAAATGCATGGTGAAAACGAGACCACCCAGCCTCATACTCGAAACAGTGACAGTAGGGGTGGCAGGCAGTTGCGAAATCCAAACAATTTAGTTGAAACTGGAACACTACCCATTCTTCGCCTTGCTCACTTTTTTTTACTAAATGAAAGTGATGATGATGATCGAATACGTGGTTTAACCAAAGAGCAGATTGACAATCTTTCCACCAGGCACTATGAGCATAACAGTATTGATAGTGAACTAGGTAAAATCTGTAGTGTTTGTATTAGTGACTATGTAACTGGAAACAAGCTCAGGCAATTACCTTGCATGCATGAATTTCACATTCATTGTATTGACCGATGGCTCTCAGAGAATTGCACTTGTCCGATCTGTCGGCAGCCTGTTTTAGGGTCTAACATAGCAAACAATGGGTAA
Amino sequence
MNQSRSRSDGGSEETLPQDHNHHENERRWQQERLHREEAYYQFINELNDEDYRLMRDHNLLGTPGEITSEELQQRLDGVKEQLASQPDLRDGTNYRDSEVPRESSHEDSLLEWLNTFRRTGNATRSGQNGNQTWRAVSRTNPNNGEFRFSLEIHVNHENRGFEIHGEDYTDIPLSDSNRDHTANRQQRSTSPVARRTRSQTSVNFNGSSSNIPRTRLASRGQNPAEGSFSTLGRLRNGIGGAAGIPRANASRTNFSSHTNQSGGSELRQREGQRFGAAHVWENGARSNVTVRNTNQRLEPIRLRSTSNSRSRSPIQRQSGTVYHNSQRESRPVQQTTRRSVRRRGRTRVFLEQDRERERRGTAYTPFSNSRLVSRITVEEGEESSRSSTAVRRHPTITLDLQVRRIRPGENRDRDSIANRTRSRVGLAENTVTIESNSGGFRRTISRLERSGIRTYVSTITVPLRRISENELVEPSSVALRSILRQIMTGFGELSSLMEADSESELQRNGQHLPDMHSELSNLGTDNNRSQHREGSSQDRQAQGDSTEMHGENETTQPHTRNSDSRGGRQLRNPNNLVETGTLPILRLAHFFLLNESDDDDRIRGLTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSNIANNG*